Query= MSMg01no478_k21.b1 MSMg01no478_k21.b1 CHROMAT_FILE:
MSMg01no478_k21.b1 PHD_FILE: MSMg01no478_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:27 2005
(414 letters)
>mm_chr15_88216703_88217516
Length = 814
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Plus
Query: 1 acgtttgtgccttttggctacaattaagtccgatgctgggtttgcacttcgctttaatta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 acgtttgtgccttttggctacaattaagtccgaggctgggtttgcacttcgctttaatta 260
Query: 61 ctaatagattaatccaagccgaaacgacgatctgtaattagcattttgttgattgatttg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaatagattaatctaagccgaaacgacgatctgtaattagcattttgttgattgatttg 320
Query: 121 ttgcaaagaaatgaccctgattctgtttcagtaatcagtttatagctaattggctttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcaaagaaatgaccctgattctgtttcagtaatcagtttatagctaattggctttctt 380
Query: 181 tcattaagatataaagagccacccatacagagtagtcaaggtgtgcgggtcacaaacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcattaagatataaagagccacccatacagagtagtcaaggtgtgcgggtcacaaacatc 440
Query: 241 agacaggctgtcacttgtccgcggtggccttctttgatttttatggaaatctaattattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacaggctgtcacttgtccgcggtggccttctttgatttttatggaaatctaattattg 500
Query: 301 agtaaattaagagatttgacctctgaggaaaggctgtctagtgacttccagacattggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtaaattaagagatttgacctctgaggaaaggctgtctagtgacttccagacattggtc 560
Query: 361 acccaaggggaaggccaaggacgaacaacgctcagttgtgatgatgtcatctgt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccaaggggaaggccaaggacgaacaacgctcagttgtgatgatgtcatctgt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_k21.g1 MSMg01no478_k21.g1 CHROMAT_FILE:
MSMg01no478_k21.g1 PHD_FILE: MSMg01no478_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:27 2005
(666 letters)
>mm_chr15_88354067_88355131
Length = 1065
Score = 1009 bits (522), Expect = 0.0
Identities = 594/620 (95%), Gaps = 8/620 (1%)
Strand = Plus / Minus
Query: 44 actttctggcttgctcatgggcttgtgttcagctagctttcctatagctcagttcatctg 103
||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1065 actttctggcttgctcacgggcttgtgttcagct-gctttcctatagctcag-tcatctg 1008
Query: 104 ctcagggatggagctgtccacgatactctgggccctcccatgtctgtcaccaaccaaggc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ctcagggatggagctgtccacgatactctgggccctcccatgtctgtcaccaaccaaggc 948
Query: 164 gactctccagagacatggccacaggccaatctgatctggtcaacccttcagttgagactc 223
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 947 aactctccagagacatggccacaggccaatctgatctgggcaacccttcagttgagactc 888
Query: 224 cttcaggtgatgcttggctgtgtatatatgttcaataggatagacacctggcttgtgtcc 283
|||||||||||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 887 cttcaggtgatgctaggctgtgt---taagttcaataggatagacacctggcttgtgtcc 831
Query: 284 atcctggtaaccaagggttgcttcttgaaatacctaatgcaatcctctttatgtactttt 343
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 830 atcctggtaaccaagggttgcttcttgaaatacctaatgcaatcctctttatgtgctttt 771
Query: 344 aaagcctccacattgcttcggcctcttggaccatcccttagagcatatggtgcacctgct 403
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 770 aaagcctccacattgcttcggcctcttggaccatcccttagagcacatggtgcacctgct 711
Query: 404 tccagcat-gcttcctgcctgcagagcaagcttgttcgtctttggcaaaagtctctgctg 462
|||||||| || ||| || || ||||||||||||| |||||||||| || ||||||||
Sbjct: 710 tccagcatggcgtcc--actccacagcaagcttgttcatctttggcaacagcctctgctg 653
Query: 463 cttagttgcatcccagatccttgaatctgtgctttaaccatgtgatgggctcttcccacc 522
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cttcgttgcatcccagatccttgaatctgtgctttaaccatgtgatgggctcttcccacc 593
Query: 523 tctggacactggtgctgtaagcggcctctcagtttagcatggggttagcacccttcctct 582
|||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 592 tctggacactggtgttgtaagcggcctcttagtttatcatggggttagcacccttcctct 533
Query: 583 aagagctgagggtttctccagtgatgtgggtccctgtgtctacatggttgattgtccatg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aagagctgagggtttctccagtgatgtgggtccctgtgtctacatggttgattgtccatg 473
Query: 643 ccacctgcccatctctgcgg 662
||||||||||||||||||||
Sbjct: 472 ccacctgcccatctctgcgg 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space: 692080
Effective search space used: 692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
