Query= MSMg01no478_n15.b1 MSMg01no478_n15.b1 CHROMAT_FILE:
MSMg01no478_n15.b1 PHD_FILE: MSMg01no478_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:39 2005
(614 letters)
>mm_chr15_22688740_22689753
Length = 1014
Score = 1110 bits (574), Expect = 0.0
Identities = 604/614 (98%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 1 ctatgcattgatggctatgtatacatttatgttacatcgcactaaaaaaatgcataattt 60
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 201 ctatgcattgatggctatgtatacatttatgttacatctcact-aaaaaatgcataattt 259
Query: 61 aaggtagaccattgcaaggactccagctggccagtatgttcattttcctcgtgcctggct 120
| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 260 agggtagaccattgcaaggactccagctggccagtatattcattttcctcatgcctggct 319
Query: 121 tttcttcaagggtttactctttctttcttaaccataggaaggaagtatatttaaacattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttcttcaagggtttactctttctttcttaaccataggaaggaagtatatttaaacattt 379
Query: 181 attcacatctaaattggatgcagactgtataagaaagattctcaactcatca-tttgact 239
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 380 attcacatctaaattggatgcagactgtataagaaagattcttaactcatcattttgact 439
Query: 240 tgcttttataaatatatattctatcactgttactcttcatacactaaagaatatgctttc 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgcttttataaaaatatattctatcactgttactcttcatacactaaagaatatgctttc 499
Query: 300 aagatttttgtattcattaaaataaaggcttatttttaaagttttaatatgtggtgttac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagatttttgtattcattaaaataaaggcttatttttaaagttttaatatgtggtgttac 559
Query: 360 aaaaggaatgaaagtcacggtcaaatatcttacacattttctcacttaccctgctttctt 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaaggaaagaaagtcacggtcaaatatcttacacattttctcacttaccctgctttctt 619
Query: 420 tagatagttagcataatatgtttctttatgaagcctgtaatttcaaagtgttgctgtgag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tagatagttagcataatatgtttctttatgaagcctgtaatttcaaagtgttgctgtgag 679
Query: 480 aaccaaaacatagcagttagaatcactttgtcaggctgccttttatcaattcatgagttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaccaaaacatagcagttagaatcactttgtcaggctgccttttatcaattcatgagttc 739
Query: 540 tttgaagatttatatttcctctgacttagtctagaatcttctaattaataaacccaatct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttgaagatttatatttcctctgacttagtctagaatcttctaattaataaacccaatct 799
Query: 600 aattttacaaagga 613
|||||||||||||
Sbjct: 800 tattttacaaagga 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_n15.g1 MSMg01no478_n15.g1 CHROMAT_FILE:
MSMg01no478_n15.g1 PHD_FILE: MSMg01no478_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:39 2005
(193 letters)
>mm_chr15_22910611_22911202
Length = 592
Score = 311 bits (161), Expect = 1e-89
Identities = 173/177 (97%), Gaps = 1/177 (0%)
Strand = Plus / Minus
Query: 17 atacctctttctcaatctactaatagatccatcaagtatgtaaatattttgtattataac 76
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 392 atacctctttcccaatctactaataaatccatcaagtatgtaaatattttgtattataac 333
Query: 77 caaggctttttgaatgagattatttattccccacttctttgaaagtcaagacagataata 136
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caagg-tttttgaatgagattatttattccccacttctttgaaagtcaagacagataata 274
Query: 137 tgtttttctgtaattaagaataacttagatattatgagaatggtgacttaaaacaat 193
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 273 tgtttttctgtaattaagaataacttaaatattatgagaatggtgacttaaaacaat 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 592
Length adjustment: 8
Effective length of query: 185
Effective length of database: 584
Effective search space: 108040
Effective search space used: 108040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
