Query= MSMg01no479_b14.b1 MSMg01no479_b14.b1 CHROMAT_FILE:
MSMg01no479_b14.b1 PHD_FILE: MSMg01no479_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:58 2005
(174 letters)
>mm_chr15_77944938_77945511
Length = 574
Score = 325 bits (168), Expect = 1e-93
Identities = 172/174 (98%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 1 aaattattctgatctctctctctctctctctctctctctctctctctctctctctctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaattattctgatctctctctctctctctctctctctctctctctctctctctctctctc 262
Query: 61 tctctctctccattctaataatgtttgcattcatctcaaccatattaagaatctctgaat 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctctctc--cattctaataatgtttgcattcatctcaaccatattaagaatctctgaat 320
Query: 121 caggatgttgataaatatttcttgtgcacctactatgggcaaagttcctagact 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggatgttgataaatatttcttgtgcacctactatgggcaaagttcctagact 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no479_b14.g1 MSMg01no479_b14.g1 CHROMAT_FILE:
MSMg01no479_b14.g1 PHD_FILE: MSMg01no479_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:58 2005
(194 letters)
>mm_chr15_78140144_78140737
Length = 594
Score = 362 bits (187), Expect = e-104
Identities = 190/191 (99%)
Strand = Plus / Minus
Query: 1 ccagagagacattctctaagcctgtgccctccagcccaaggcaatgtcctcctgaccttg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 391 ccagagagacattctctaagcctgtgccctctagcccaaggcaatgtcctcctgaccttg 332
Query: 61 ccacagcagaaagagttagcaccgtgggatgtagcacccgagagaaatcggggtcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccacagcagaaagagttagcaccgtgggatgtagcacccgagagaaatcggggtcagaac 272
Query: 121 agaatcttctctccagcaaatccagccagggatttccctgtcagggtggagtattgtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agaatcttctctccagcaaatccagccagggatttccctgtcagggtggagtattgtaag 212
Query: 181 ctctgcctgga 191
|||||||||||
Sbjct: 211 ctctgcctgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
