Query= MSMg01no482_k15.b1 MSMg01no482_k15.b1 CHROMAT_FILE:
MSMg01no482_k15.b1 PHD_FILE: MSMg01no482_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:37 2005
(547 letters)
>mm_chr15_25453909_25454855
Length = 947
Score = 965 bits (499), Expect = 0.0
Identities = 535/547 (97%)
Strand = Plus / Plus
Query: 1 atcacctcaaagccagatttcctcatattcgcctacagataaagctggcttccttctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcacctcaaagccagatttcctcatattcgcctacagataaagctggcttccttctgag 260
Query: 61 aggaatgcagtagaggccaggcccagttctccttctgtgacctcacctgacctggaagaa 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaacgcagtagaggccaggcccagttctccttctgtgacctcacctgacctggaagaa 320
Query: 121 tggtgccttccatgatggcagagtcagaattgctttctctgtctcttttaagtaccaaga 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtgccttccatgatggcaaagtcagaattgctttctctgtctcttttaagtaccaaga 380
Query: 181 cttgatcgtggactgctctgagtaaagctagaacagagatcatcaaaggccacttagccc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgatcatggactgctctgagtaaagctagaacagagatcatcaaaggccacttagccc 440
Query: 241 ctgtgcagaaggagcactccctcccaaataagaaggtcaaatgagagaagcagagaggaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ctgtgcagaaggagcactccctcccaaataagaaggtcaaatgaaagaagcagagaggaa 500
Query: 301 atggggagtggggaactgtacaaagggatggaggactaggtagctgagatcactacaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggggagtggggaactgtacaaagggatggaggactaggtagctgagatcactacaaga 560
Query: 361 cagtaatgattaatttgggcttcttgtcctaatgaatcctgcttactctatcaataagga 420
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct: 561 cagtaatgattaatttgggcttcttgtcctaatgaagcctgcttgctctatcaataccga 620
Query: 421 agctgtagcaggatgcttggtgtctaaacttgtggtgaagggtttttggtttttgtttgt 480
||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 621 agctgtagcaggatgcttggtgtctaaacctgtggtgaagagttttgggtttttgtttgt 680
Query: 481 ttttctcactcttctgagatacatttcacttttctttccttagttcagtgcatgttttag 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 ttttctcactcttctgagatacatttcacttttctttccttagtttagtgcatgttttag 740
Query: 541 atagctt 547
|||||||
Sbjct: 741 atagctt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_k15.g1 MSMg01no482_k15.g1 CHROMAT_FILE:
MSMg01no482_k15.g1 PHD_FILE: MSMg01no482_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:37 2005
(656 letters)
>mm_chr15_25622119_25623175
Length = 1057
Score = 1054 bits (545), Expect = 0.0
Identities = 574/587 (97%), Gaps = 7/587 (1%)
Strand = Plus / Minus
Query: 71 ggggaagagaaggcagtagggggctggggtgatgttaggataaaggccattaaagtgaag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 ggggaagagaaggcagtagggggctggggtgatgttaggataaaggccattaaagtgaag 995
Query: 131 ttctcctaaaaacagcagcgttgttaataacctaagagaaggtgaacagggcatgcttgt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 ttctcctaaaaacagcagcgttgttaataacctaagagaaggtgaacagggcatgcttgt 935
Query: 191 gtgtgtgtttaactcaggaggcagaggcaagtggagctctgagtttgaggtctacatgat 250
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gtgtgtgtttaactcaggaggcagaggcaagtggagctctgagtttgaggtctacatgag 875
Query: 251 agccccaggatacaagacaaaaccaacaagagttcatagcaggaggtgagacggttttcc 310
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 874 agccccaggatacaaga------caacaagagttcatagcaggaggtgagacggttttcc 821
Query: 311 tggtatttgcagcaggagcagagcaagagggttgaaaaccgactgttcaaaggagcagta 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tggtatttgcagcaggagcagagcaagagggttgaaaaccgactgttcaaaggagcagta 761
Query: 371 catgcctttgcccctagcagaggaaaggcagaggcaggtgatggcggtgaaggtctctgg 430
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 760 catgcctttgcccctagcagaggaaaggcagaggcaggtgatggcggtgaaggtctctag 701
Query: 431 aaacaaaggatgtaaccccctagcattctctactggaaatatggtccagtctgagaatat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aaacaaaggatgtaaccccctagcattctctactggaaatatggtccagtctgagaatat 641
Query: 491 ctgctcagaaaacctagaggaattccgggcgatgcttcccacagagctgaaggatcacga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ctgctcagaaaacctagaggaattccgggcgatgcttcccacagagctgaaggatcacga 581
Query: 551 tcaataagccgtgatcaataagctgatcatgactg-atttgttgaacctaccagtccaca 609
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 580 tcaataagccgtgatcaataagctgatcatgactgaatttgttgaacctacccgtccaca 521
Query: 610 ggcccagggcggggctcctccctgctctgctcactgcacacccagcc 656
||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 520 ggcccagggaggggctcctccctgctctgcttgctgcacacccagcc 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space: 676362
Effective search space used: 676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
