Query= MSMg01no483_i09.b1 MSMg01no483_i09.b1 CHROMAT_FILE:
MSMg01no483_i09.b1 PHD_FILE: MSMg01no483_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:45 2005
(670 letters)
>mm_chr15_81898600_81899670
Length = 1071
Score = 1236 bits (639), Expect = 0.0
Identities = 660/667 (98%), Gaps = 1/667 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaggcc-tcctcaagtgcaccgagtcctctacctgtggggcaagtggacagcgc 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggccattctcaagtgcaccgagtcctctacctgtggggcaagtggacagcgc 264
Query: 64 caccagacagaagaactggtaaggatgagtgagcccaaaccccacaaatcttggaattga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccagacagaagaactggtaaggatgagtgagcccaaaccccacaaatcttggaattga 324
Query: 124 gagccagaaggatgaggccactcattgcctgctctctgctctggaacaagtaaccaagac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagccagaaggatgaggccactcattgcctgctctctgctctggaacaagtaaccaagac 384
Query: 184 agcctattgaatccatggccattagtctcttagcataaaaacctggagtgctccaagctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcctattgaatccatggccattagtctcttagcataaaaacctggagtgctccaagctt 444
Query: 244 ataagtcacctggataggtcccttcttgttcattccttcccagaaaaggggtttaatccc 303
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 445 ataagtcacctggataggtcccttcctgggcattccttcccagaaaaggggtttaatccc 504
Query: 304 tggttcaccttgaatagggtgaacgcgttcacatccaccattaaggcagtttgagcaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggttcaccttgaatagggtgaacgcgttcacatccaccattaaggcagtttgagcaagg 564
Query: 364 atgaaacaaaccatctcttcgtcagggattgctgtggaggggaggccttgtcataaagag 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 atgaaacaaaccatctcttcgtcagggattgctgtggaagggaggccttgtcataaagag 624
Query: 424 ccgaaatctcctggagatggccttctctctcccagctcctcccaactctccctgaactca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccgaaatctcctggagatggccttctctctcccagctcctcccaactctccctgaactca 684
Query: 484 cttgggaccaaaccgagttccaccccggacctgggctctgccttccagttcctgcctggc 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttggggccaaaccgagttccaccccggacctgggctctgccttccagttcctgcctggc 744
Query: 544 atgccctaagggaagcatgaataagggacctccattcccatcagtatcccagtggcgcct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgccctaagggaagcatgaataagggacctccattcccatcagtatcccagtggcgcct 804
Query: 604 aggaacacaggagactgggaaccacagatatcatcctccatcccgccgaggaccgtcgtt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aggaacacaggagactgggaaccacagatatcatcctccatcccgccgaggaccgtcgtt 864
Query: 664 acagact 670
|||||||
Sbjct: 865 acagact 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1071
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1061
Effective search space: 700260
Effective search space used: 700260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_i09.g1 MSMg01no483_i09.g1 CHROMAT_FILE:
MSMg01no483_i09.g1 PHD_FILE: MSMg01no483_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:45 2005
(344 letters)
>mm_chr15_81922316_81923059
Length = 744
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Minus
Query: 1 agaagagctacacagccctccgagtctctactgctccatcacacatgactcttctatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agaagagctacacagccctccgagtctctactgctccatcacacatgactcttctatacc 435
Query: 61 ctatgtgcatcccccgagcatctcatgctatgtgctaccacatctctgcctttcccaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctatgtgcatcccccgagcatctcatgctatgtgctaccacatctctgcctttcccaatg 375
Query: 121 ctgctctctctgcctataacacaccttccttggattctacacaactcagagaattcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgctctctctgcctataacacaccttccttggattctacacaactcagagaattcacat 315
Query: 181 atacactcaagagtatccctccctcagagactgtcagcccttcgtgggtaggagtcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atacactcaagagtatccctccctcagagactgtcagcccttcgtgggtaggagtcattc 255
Query: 241 tttctgtcccctctcactagtgctaccgcagacatgacatatgtctgtttatatgccagg 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 254 tttctgtcccctctcactagtgctaccgcagacatgacctatgtctgtttatatgccagg 195
Query: 301 aagtggtactgcaagcctttaatcccagcacttgggaggcagag 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aagtggtactgcaagcctttaatcccagcacttgggaggcagag 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
