GGGGNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAG
GATGCGCGGAATTCTATCATATTTCCAAATTGCCTTTTCCAAATAGCCAA
AAGAGAAGCACAAAATAACGAACTTACAAAATGTTTTTGGAAAATATTCT
CTCGTTTCAGAGACTATGGTAATACTAAGGTTCCGTTTTCTTCTAGAGAT
CTGGAACTTGTATCAGCAGAAAAATTTTTTTATAAGCATGCTTACTAACC
CACGTATTAATTTAAATTTTAAAAATCAAATTGCGTCCAATGTTATATTG
TTTGAGCGTTCAGTTTTTTTTTCTTTTGCTTCGTGCTGACACATTCCTGC
CACTGGTAGAAGCCTTTGCAAACAGGGCAGTCCTCTGAAAGCTTTTATGT
AATCTGCTTAAATAAATTACTAATTATTTCTAAGCAGGGATAAATGAAAA
GTCACCGTGTGACAGATAATTCATAATGGTTATTCTTTTTTTTTTTTAAA
GCAACAACTTGGTTTTTTTCCTTCCTAGCTCGTCAGCCGTCTGGCAGGTT
GTTTTCCTGCANTGGATCAGAATCCACATGCTGGACCATTTGCCCCATCT
GTTAAAGGAATGTCCTGGGGGGAGGGCAATCTTAAAACCCTGGGGGGGAA
GACGTGGAAATGTGCACTTTCAGGGTAAACAGTAACCCCCGGGGGGGTGA
AAACCAAAAACAAAAAGGGGGGAAAAAAA

NNNNCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATATACTGAAGTTC
CTCTGAGACATTTGGCTATGTGGACTGAAAAGCTACTGGGTTCTTGGAAC
TTGCATTGGTAGACAGCTATTGTTGGATGAGGTGGACCACTGCCTGTGCA
TGTGCGTGCGCACGTGCGCGCACACACACACACACACACACACACACACA
AATGTGTATATGTGTATATGTGTTATATATAGGTGTATATGTATGTATTT
ATATATATTACACATGTATATATATATGTGTGTGTGTATATGTATGTACT
TATATAAATGTATGNATTATATTTTATTNTAATATATATANAATTGGATA
TTTTTTAAAAAATATAAGGTTTAATTTTAANNNNAAAAAAGTAAAAAAAA
AGTGTATTATTNGTTGTGTATTAAAATTATTAATAAATATGAAAGTGGAT
ATATTGTTTTAATGGTGATGTATTTTATTTTTAAATATGTTTTGTTTTTT
AATAATTTATTATATGTATTTTTTTTTAATATTTTTTTTGTTAAATTTTT
TTTTTGATATANATTATTATTTATTTTTTTTTTATATTTTTTTGGGGAGA
GTGTTATGATATTTTTTNTATATAGTGTTTTTATATGTGTTATGGTATTA
TAAGAGAAAAAGAAAGTTATATTGGGAGTTATTTGATTGATTTTAANTTT
TTATTATAAATTATTTA

Query= MSMg01no485_c19.b1 MSMg01no485_c19.b1 CHROMAT_FILE:
MSMg01no485_c19.b1 PHD_FILE: MSMg01no485_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:01 2005
         (416 letters)



>mm_chr15_93704063_93704878
          Length = 816

 Score =  752 bits (389), Expect = 0.0
 Identities = 410/417 (98%), Gaps = 2/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgccttttccaaatagccaaaagagaagcacaaaataacgaacttacaaaatgttttt 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgccttttccaaatagtcaaaagagaagcacaaaataacgaacttacaaaatgttttt 260

                                                                       
Query: 61  ggaaaatattctctcgtttcagagacta-tggtaatactaaggttccgttttcttctaga 119
           |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ggaaaatattctctcgttccagagactattggtaatactaaggttccgttttcttctaga 320

                                                                       
Query: 120 gatctggaacttgtatcagcagaaaaatttttttataagcatgcttactaacccacgtat 179
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gatctggaacttgtatcagcagaaaaa-ttttttataagcatgcttactaacccacgtat 379

                                                                       
Query: 180 taatttaaattttaaaaatcaaattgcgtccaatgttatattgtttgagcgttcagtttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 taatttaaattttaaaaatcaaattgcgtccaatgttatattgtttgagtgttcagtttt 439

                                                                       
Query: 240 tttttcttttgcttcgtgctgacacattcctgccactggtagaagcctttgcaaacaggg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttttcttttgcttcgtgctgacacattcctgccactggtagaagcctttgcaaacaggg 499

                                                                       
Query: 300 cagtcctctgaaagcttttatgtaatctgcttaaataaattactaattatttctaagcag 359
           ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 500 cagtcctctgaaagcttttatgtaatctgtttaaataaattactaatcatttctaagcag 559

                                                                    
Query: 360 ggataaatgaaaagtcaccgtgtgacagataattcataatggttattcttttttttt 416
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggataaatgaaaagtcaccgtgtgacagataattcataatggttattcttttttttt 616


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space:   328449
Effective search space used:   328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)