Query= MSMg01no486_b06.b1 MSMg01no486_b06.b1 CHROMAT_FILE:
MSMg01no486_b06.b1 PHD_FILE: MSMg01no486_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:16 2005
(164 letters)
>mm_chr15_53337619_53338182
Length = 564
Score = 302 bits (156), Expect = 9e-87
Identities = 162/164 (98%)
Strand = Plus / Plus
Query: 1 catccatgtgtatacacgaatcattccttccaaaaacataggcattcactgtggaagagg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccatgtgtatacatgaatcattccttccaaaaacataggcattcactgtggaagagg 260
Query: 61 cacctgtaagaagcttggcaaaagcatatctgccttctgcttccactcagatcacttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacctgtaagaagcttggcaaaagcatatctgccttctgcttccactcagatcacttctt 320
Query: 121 actcccatcatattgttttgaatctcagcaggctcgattatcaa 164
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 actcccatcatattgatttgaatctcagcaggctcgattatcaa 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no486_b06.g1 MSMg01no486_b06.g1 CHROMAT_FILE:
MSMg01no486_b06.g1 PHD_FILE: MSMg01no486_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:16 2005
(633 letters)
>mm_chr15_53469591_53470624
Length = 1034
Score = 716 bits (370), Expect = 0.0
Identities = 409/422 (96%), Gaps = 1/422 (0%)
Strand = Plus / Minus
Query: 157 acgcagcatgaggctgtcaggcagagagagtcctcacttgctctcagaaaagtaatactt 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1034 acgcagcatgaggctgtcaggcagagagagtcctcacttgctctcagaaaagtaagactt 975
Query: 217 ttaattggattcaggtttttggatgattggatagggccctgtgaacacatggtatggcca 276
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 974 ttaattggattcaggttttcagatgattggatagggccctgtgaacacatggtatggcca 915
Query: 277 tctgctttgcaatggctacaagggaaaaagactaatttcacctgaaatatatctacaggt 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tctgctttgcaatggctacaagggaaaaagactaatttcacctgaaatatatctacaggt 855
Query: 337 gtatctagaatcctatttaggcaaatatctgggcatcctgtagtctaggcaatttaacac 396
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gcatctagaatcctatataagcaaatatctgggcatcctgtagtctaggcaatttaacac 795
Query: 397 ataaaagtaaccattagactgagtaggatgacttcttggctccaaaatgaacactgtgac 456
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 794 ataaaagtaaccattagactgagtaggatgacttcttggctccaaaatgaacgctgtgac 735
Query: 457 tactttcctaccatgaattgtttatttttctgattatcttatttttctcaca-aaattaa 515
||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 734 tactttcctaccatgaattgtttctttttttgattatcttatttttctcacacaaattaa 675
Query: 516 ttgttggctatgaccaacttttgcaagttaatacttgagacatcaaaataaaagattttt 575
||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 674 ttgctggctatgaccaacttttgcaagttaatacttgagacgtccaaataaaagattttt 615
Query: 576 tt 577
||
Sbjct: 614 tt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
