NNNGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATCTTCTCTCCCAACATTTTGTATTTGTTAAGTACTCTTC
CAGGACTTACTATTTTGTTTTATTATCTTTTAGAGGGCTTTGCAGTAGCC
CTGTTAGCTGTGGTCATATCAGCTTTAACAATAAGGTTTCTCTTTTCCTC
AGACTATGAATTACTTTTTTTGTCCCCATATTTTGTGACCAAGACCTAAT
CAGAATTCCTTCTGTGTTTCTCACCAGACTTTTTCTATCTCCTCTATATA
ACTCAACATATTTAAATATCTTTTCCTTCTCTTTATATGTAGGCATCTTG
GCCAAAACATATTTCCTTCACTGCACTGATTTTAGCTGTCTCCTGTTTGT
TGCTTCTTGGTCACGTGTGCTTTCTCCCCACCTCCTCTTCCAGGTGGGAC
AGGGTTTCACTCAGGCTGAATATGTGTTTCTACATTTTGAGCCTCTGACA
TTTCCAAATACAGGAATTACCAATGAAGATTCAGGAACGATGTAAGATAG
CAGCACATATTATTTATTTGTATTTTATGAGATATTTTATGAGGTATTAA
TCTTTGGATGAGTAATAAAAAACCTTTTCACATGACTAATATTATGTTAC
ATGCAATTTATTAATTTACAATTTTATTTTATTCACAAATCAAATTCTAT
TCCAAAACAAATAATTTGTTTTATATTTCCCTTCTACTGTTATAGGCTAG
CAATTTTACTCTATN

NNCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTTCTGTTTCTTTCGTTGA
TACAATAATATATTTCCATTTATTCTCCTGACCCTCTGTGTGTTTCTTTT
GTCACTCAAGTTACATGATCCTGCCCCCTTTATGCTTCTCCCCTCTACTC
GTGTATCTAGAGTCCACCTACCTCTGTCTATTATGATTATTTTGTTACCC
CTTCTAAGTGGTATTTAAGGTTCCTTACTTGTGAACTTCCTTCTTGTTTA
ACTTTTTAGGGTCTGTGATGTGTGTAATGAATACTCTGTATTTTTTATCT
CATATCCATTTATCAATGAATACATACCATGAATGTCCCTTTGAGTATGG
GTTAATTCGCTCAAGATGATATTTTCTAGTTCCATCCATTTGCCTGAAAA
ATTTATGATGTCCTTGTTTTTAATAGCTGAATACTATTCAATTATGTAAA
TGAAAAACATTTTTATATTTATTTTTCATTTGAGGGATATCTGGGTTGCT
TCCATTTTCTGATGATCTATCAGATTGATTTTAAGAGTAGATGTACCAAT
TTGTAATCCCATCGGAAATGAAGGAGTCTTCCTCTTTCTCTACATCCTTG
CCAGCATGTGCTGTCACTTAAGTGTGTTATTTTAGCCATTCTGATAGGTG
TAAGGTAGAATCTTACCGTTATTTCATTTTCATTTCCCTGAAACAT

Query= MSMg01no487_b09.b1 MSMg01no487_b09.b1 CHROMAT_FILE:
MSMg01no487_b09.b1 PHD_FILE: MSMg01no487_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:35 2005
         (609 letters)



>mm_chr15_17271242_17272248
          Length = 1007

 Score = 1106 bits (572), Expect = 0.0
 Identities = 600/610 (98%), Gaps = 4/610 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttgtatttgttaagtactcttccaggacttactattttgttttattatcttttagag 60
           |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 201 attttgtatttgttaagtactcttccaggacttactattttgtttt-tcatcttttagag 259

                                                                       
Query: 61  ggctttgcagtagccctgttagctgtggtcatatcagctttaacaataaggtttctcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggctttgcagtagccctgttagctgtggtcatatcagctttaacaataaggtttctcttt 319

                                                                       
Query: 121 tcctcagactatgaattactttttttgtccccatattttgtgaccaagacctaatcagaa 180
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 320 tcctcagactatgaattacttttt--gtccccatattttgtgaccaagacctaatcagaa 377

                                                                       
Query: 181 ttccttctgtgtttctcaccagactttttctatctcctctatataactcaacatatttaa 240
           ||||||||||||||||||||| |||| || |||||||||| |||||||||||||||||||
Sbjct: 378 ttccttctgtgtttctcaccaaacttcttgtatctcctctgtataactcaacatatttaa 437

                                                                       
Query: 241 atatcttttccttctctttatatgtaggcatcttggccaaaacatatttccttcactgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atatcttttccttctctttatatgtaggcatcttggccaaaacatatttccttcactgca 497

                                                                       
Query: 301 ctgattttagctgtctcctgtttgttgcttcttggtcacgtgtgctttctccccacctcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgattttagctgtctcctgtttgttgcttcttggtcacgtgtgctttctccccacctcc 557

                                                                       
Query: 361 tcttccaggtgggacagggtttcactcaggctgaatatgtgtttctacattttgagcctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcttccaggtgggacagggtttcactcaggctgaatatgtgtttctacattttgagcctc 617

                                                                       
Query: 421 tgacatttccaaatacaggaattaccaatgaagattcaggaacgatgtaagatagcagca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgacatttccaaatacaggaattaccaatgaagattcaggaacgatgtaagatagcagca 677

                                                                       
Query: 481 catattatttatttgtattttatgagatattttatgaggtattaatctttggatgagtaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 catattatttatttgtattttatgagatattttatgaggtattaatctttggatgagtaa 737

                                                                       
Query: 541 taaaaaa-ccttttcacatgactaatattatgttacatgcaatttattaatttacaattt 599
           ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 738 taaaaaaaccttttcacatgattaatattatgttacatgcaatttattaatttacaattt 797

                     
Query: 600 tattttattc 609
           ||||||||||
Sbjct: 798 tattttattc 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1007
Length adjustment: 10
Effective length of query: 599
Effective length of database: 997
Effective search space:   597203
Effective search space used:   597203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)