Query= MSMg01no490_i14.b1 MSMg01no490_i14.b1 CHROMAT_FILE:
MSMg01no490_i14.b1 PHD_FILE: MSMg01no490_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:09 2005
(414 letters)
>mm_chr15_35604453_35605266
Length = 814
Score = 793 bits (410), Expect = 0.0
Identities = 413/414 (99%)
Strand = Plus / Plus
Query: 1 tcagttaatagtagcaaatatgactggattggagccatcaaccaaggctacagaggtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagttaatagtagcaaatatgactggattggagccatcaaccaaggctacagaggtaac 260
Query: 61 tattacctgatgtctattcttattgcgtttttacaaactttataaaggacacttaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattacctgatgtctattcttattgcgtttttacaaactttataaaggacacttaactaa 320
Query: 121 acgctttctgttaactagcctgcattaactttttccaaaatatgtccataaactgtttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgctttctgttaactagcctgcattaactttttccaaaatatgtccataaactgtttta 380
Query: 181 gattgatgtcttatgtttttaatttgtatagtctcttttcctcttatcatgcaacttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattgatgtcttatgtttttaatttgtatagtctcttttcctcttatcatgcaacttcaa 440
Query: 241 taaatcactgtagactgacttaagaaaatgttaggaataagattttgtttctaaagtgag 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 taaatcactgtagactgacttaagaaaatgttaggaataagagtttgtttctaaagtgag 500
Query: 301 ctgtgagaaccctggtgtcattgtcaattacttagttatttcccatgatagggcctttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgagaaccctggtgtcattgtcaattacttagttatttcccatgatagggcctttaa 560
Query: 361 ctttgttagcattctgtagtagcatcctcaaggaataataccgaaagcattcac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgttagcattctgtagtagcatcctcaaggaataataccgaaagcattcac 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_i14.g1 MSMg01no490_i14.g1 CHROMAT_FILE:
MSMg01no490_i14.g1 PHD_FILE: MSMg01no490_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:09 2005
(431 letters)
>mm_chr15_35778199_35779026
Length = 828
Score = 764 bits (395), Expect = 0.0
Identities = 421/431 (97%), Gaps = 3/431 (0%)
Strand = Plus / Minus
Query: 1 ggattacaggtgcaccatcacactcagttaaagacaatgtttgacacaaacaatttatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 628 ggattacaggtgcaccatcacactcagttaaagacaatgtttgacacaaataatttatat 569
Query: 61 accttaaaagttacagaagttaagtttggcgacacagttaaaactttgcaagggtttata 120
||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 568 accttaaaagttacagaagttaagtttggtgacacagttaacactttgcaaaggtttata 509
Query: 121 cttggaccaacaatcctctattactttggctttaggcttacatggtatactgtatcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cttggaccaacaatcctctattactttggctttaggcttacatggtatactgtatcagag 449
Query: 181 atttctcagcctttctcttaaaacctcacaaattggctagttcaacagacaaatcatgct 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 448 atttctcagcctttctcttaaaacctcacagattggctagttcaacagacaaatcatgct 389
Query: 241 gtcaaaatacagggaaagaagagagaattgtggatataaaactgcatatataaactaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtcaaaatacagggaaagaagagagaattgtggatataaaactgcatatataaactaata 329
Query: 301 aaaggtaagttctcttgtccttaaaatatgtatggcaataaaatacagagatgttgtgaa 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaaggtaagttctcttatccttaaaatatgtatggcaataaaatacagagatgttgtgaa 269
Query: 361 aataaactagtattaaaaaaaaacaacaacaaaaaacccaaaacataaaaccaacgggtg 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 268 aataaactagtattaaaaaaaaacaacaa---aaaacccaaaacataaaaccaacaggtg 212
Query: 421 caatggtgaca 431
|||||||||||
Sbjct: 211 caatggtgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 828
Length adjustment: 9
Effective length of query: 422
Effective length of database: 819
Effective search space: 345618
Effective search space used: 345618
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
