TTTGCGGCGTCAAACGAATACTAAATCCCGATAGGGGCGGAANNCCAAAT
ATTTCTACATAGGGCGATCACGCTGAGATTTTTGATTGTTTATTAATTGA
TATATTTATTCACTTCACATACTGATCACAAATCCCCTTTCCGTTCAGTC
CCTCCAGAAAACAGTATATTCCCCAACCCCTATCCTTCACCTCTGAGTAG
GGAGAGGTCCCTCTTGGGTACCAACCCATAGTCATGCATCTTGTCACTGC
AGGATAGGGCACATTCTTTTCCATTGAGGCCAGCCAAGCAGACCAGATAG
GGATTCTTTTGTTTTAGGCAGGNAACAAATTCAGGGTAAGCCCCTGCTCC
TATAGTTGTGATCCCACAGGGAGACTATGTTTCACATCTACTACATATGT
GTGCGGGGAGGGGACTAGATCCAGCCTTTGAATGCTCTTTTGCTGGTGAA
TCAGTCTCTGGGAGCCAGCACAGGAACAGACTAGTTGAATTGGTCTTCTA
ATGGATTCCCTATTCCTTCCAGGTTCTTCAATCCTTCCCCAACTTATCCA
TAAGAGTCCCTGATCTCTGTCCAATGTTGAACTGTTGGTCTCTGTATCTG
TTTCTGGTCAATGTCAAGTAGAGCCTCTCAGAGGACAGTTATGGTAGGTT
CCTTTCTGTGAACATAACGGAATATTTTTAATAGTATCATGGATTGTTTC
TGGCCCATGGTAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCAGTCACAGGAAGAATGAAGTAAGCAGGAAAAATAGTCT
TCTTAAGGGAAGAAGACAACAATTATCTAACACCAATTTTCAAGCCTGAA
TACAACACTTTTTAAGTGTTTTTCAAGGGACTCAAACTCAAGGTCTCCTG
TATATTATGCAAAGGTTCTACCCCTAATTACGTTCTTCTTTTCTTTTCTT
TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT
TCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTCTT
TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC
TTTCCTTTCCTTTCCTTTTCTCTCCTTTCCCTTCCTTTCCTTTCCTTTCC
CTTCCTTCCCCTTCTTCCCTTCCCCTTCTTCCCCTTCCCCTTCCCCTTCT
TCCCCTTCCCATTCTTCCCAATCCCCTTCCCCTTCTCTTTTCTCTTTTCT
CTTTTCTCTTTTCTCTTTTCTCTTTTCTCTTTTCTCTTTTCTCTTTTCTC
TCTTCTCTTCTCTTCTCTTCTCTTCTCTTTTCTTTTCTCTTCGTTTCGTA
TCTCTTTTCTTAACAAAAATATTTTAATTAAGTATTTTCTTCATTTACAT
TTCCCATGCTATCCCAAAAGTCCCCATTCCCTTCACCTCC

Query= MSMg01no491_k13.g1 MSMg01no491_k13.g1 CHROMAT_FILE:
MSMg01no491_k13.g1 PHD_FILE: MSMg01no491_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:38 2005
         (531 letters)



>mm_chr15_16789605_16790535
          Length = 931

 Score =  632 bits (327), Expect = 0.0
 Identities = 440/531 (82%), Gaps = 88/531 (16%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcttaagggaagaagacaacaattatctaacaccaattttcaagcctgaatacaacact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttaagggaagaagacaacaattatctaacaccaattttcaagcctgaatacaacact 260

                                                                       
Query: 61  ttttaagtgtttttcaagggactcaaactcaaggtctcctgtatattatgcaaaggttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaagtgtttttcaagggactcaaactcaaggtctcctgtatattatgcaaaggttct 320

                                                                       
Query: 121 acccctaattacgttcttcttttcttttcttttcttttcttttcttttcttttcttttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccctaattacgttcttcttttcttttcttttcttttcttttcttttcttttcttttct 380

                                                                       
Query: 181 tttcttttcttttcttttctttcctttcctttcctttcctttcctttcctttcctttcct 240
           ||                    ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tt--------------------cctttcctttcctttcctttcctttcctttcctttcct 420

                                                                       
Query: 241 tttcttttctttttcctttcctttcctttcctttcctttcctttcctttcctttcctttc 300
           ||            ||||||||||    ||   ||   |||||||| |||||||||||||
Sbjct: 421 tt------------cctttccttt----tc---tc---tcctttcccttcctttcctttc 458

                                                                       
Query: 301 ctttcctttcctttccttttctctcctttcccttcctttcctttcctttcccttccttcc 360
           |||||||||||                                        |||||||||
Sbjct: 459 ctttcctttcc----------------------------------------cttccttcc 478

                                                                       
Query: 361 ccttcttcccttccccttcttccccttccccttccccttcttccccttcccattcttccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ccttcttcccttccccttcttccccttccccttccccttcttccccttcccattcttccc 538

                                                                       
Query: 421 aatccccttccccttctcttttctcttttctcttttctcttttctcttttctcttttctc 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aatcccattccccttctcttttctcttttctcttttctcttttctcttttctcttttctc 598

                                                              
Query: 481 ttttctcttttctcttttctctcttctcttctcttctcttctcttctcttt 531
           |||||||||||||||||||||| |||||||   |||||||   ||||||||
Sbjct: 599 ttttctcttttctcttttctcttttctctt---ttctctt---ttctcttt 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 176
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)