Query= MSMg01no492_j06.b1 MSMg01no492_j06.b1 CHROMAT_FILE:
MSMg01no492_j06.b1 PHD_FILE: MSMg01no492_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:51 2005
(247 letters)
>mm_chr15_69337793_69338439
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%)
Strand = Plus / Plus
Query: 1 ctgcctcacattcacttttactgagcaccatgccagttgaataccaggctcttaaaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ctgcctcacattcacttttactgagcaccatgccagttgaataccaggctcttcaaggcc 260
Query: 61 ataagagctcttgggacaatgtaatagaaggagtatcttgcacataactgtaaagattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagagctcttgggacaatgtaatagaaggagtatcttgcacataactgtaaagattac 320
Query: 121 tcttggttgttgattgagatctagaattactgggaaatggatgtttatgtatgcatgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttggttgttgattgagatctagaattactgggaaatggatgtttatgtatgcatgtag 380
Query: 181 gggactaagtttcttaccttaacagaggtgggaataccagcccactatgagtagatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gggactaagtttcttaccttaacagaggtgggaataccagcccactatgggtagatgcag 440
Query: 241 ttggtgg 247
|||||||
Sbjct: 441 ttggtgg 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no492_j06.g1 MSMg01no492_j06.g1 CHROMAT_FILE:
MSMg01no492_j06.g1 PHD_FILE: MSMg01no492_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:51 2005
(534 letters)
>mm_chr15_69501075_69502009
Length = 935
Score = 973 bits (503), Expect = 0.0
Identities = 527/535 (98%), Gaps = 1/535 (0%)
Strand = Plus / Minus
Query: 1 ctaccattagtgatgagaaatgtgtacacaatcattaaatgtcatgggacaagaatcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctaccattagtgatgagaaatgtgtacacaatcattaaatgtcatgggacaagaatcatc 676
Query: 61 caggtagaaagctaattcaatcaaagacaaccgatttgaaaaccatcctgatataactta 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 675 caggtagaaagctaattcaatcaaagacaaccgatttgaaagccatcctgatataactta 616
Query: 121 ctgtttgcttatctcatgacatgttgctggtattttctttgtagtacatggcattgaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctgtttgcttatctcatgacatgttgctggtattttctttgtagtacatggcattgaact 556
Query: 181 aagggcagtacatatgttagctagcattctaccagtgaactacaacagtagtcccaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagggcagtacatatgttagctagcattctaccagtgaactacaacagtagtcccaccag 496
Query: 241 ctatttcttctgttattgtttccaccttcttgctttcaaactgaagcatgatgcttcatg 300
||| | || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 495 ctactactactgttattgtttccaccttcttgttttcaaactgaagcatgatgcttcatg 436
Query: 301 tttcaaaagtacagaagaaatgaatataacaagagtcatttcttgatatttag-aaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 435 tttcaaaagtacagaagaaatgaatataacaagagtcatttcttgatatttagaaaaaaa 376
Query: 360 aaacatggaaagagacaaactggggaagaaaagaagggtgaaaagtcaggacaaattaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaacatggaaagagacaaactggggaagaaaagaagggtgaaaagtcaggacaaattaag 316
Query: 420 aggcctcagaaacgggaagaaaaaagtgacatagttatattctaatctcaaaaataaaat 479
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 315 aggcctcagaaatgggaagaaagaagtgacatagttatattctaatctcaaaaataaaat 256
Query: 480 tctaaagaggccattggagatttttttctccaaatgttgaaattatttgaatcat 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tctaaagaggccattggagatttttttctccaaatgttgaaattatttgaatcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|