Query= MSMg01no498_p14.b1 MSMg01no498_p14.b1 CHROMAT_FILE:
MSMg01no498_p14.b1 PHD_FILE: MSMg01no498_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:14 2005
(336 letters)
>mm_chr15_70863740_70864473
Length = 734
Score = 613 bits (317), Expect = e-180
Identities = 332/337 (98%), Gaps = 4/337 (1%)
Strand = Plus / Minus
Query: 1 gactaattactgcaattcctttctactgttggcatcactaacactgatggtgactcttct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gactaattactgtaattcctttctactgttggcatcactaacactgatggtgactcttct 475
Query: 61 cctgttgtataactggagtgttttttttttaaattgtcctgaaagttttttggctctctg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 474 cctgttgtataactggagtgtttttttttt-aattgtcctgaaagttttttggctctctg 416
Query: 121 ttgatagggaaaaaaaaagatagctcttgagttt-ccattttcttattaagaaaaattac 179
||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 415 ttgataggg-aaaaaaaagatagctcttga-tttcccattttcttattaagaaaaattac 358
Query: 180 tagtctcttgggttataaaaatgggagcagtgtaaagaaaaacaatgtttctttcacttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tagtctcttgggttataaaaatgggagcagtgtaaagaaaaacaatgtttctttcacttt 298
Query: 240 ttctagaaacttcttagttctaaaatcatatgggaattattaacttattggttgttactc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttctagaaacttcttagttctaaaatcatatgggaattattaacttattggttgttactc 238
Query: 300 ctattcattgccctggttccagtgagtgacatactta 336
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctattcattgccctggttccagtgagtgacatactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 734
Length adjustment: 9
Effective length of query: 327
Effective length of database: 725
Effective search space: 237075
Effective search space used: 237075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_p14.g1 MSMg01no498_p14.g1 CHROMAT_FILE:
MSMg01no498_p14.g1 PHD_FILE: MSMg01no498_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:14 2005
(390 letters)
>mm_chr15_70733207_70733997
Length = 791
Score = 671 bits (347), Expect = 0.0
Identities = 380/391 (97%), Gaps = 1/391 (0%)
Strand = Plus / Plus
Query: 1 tgacaaccactagcagttggaagaggaggaaaaatcttgaataagtttgcacccttgtcc 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tgacaaccactagcagttggaagaggaggaaaaggcttgaataagtttgcacccttgtcc 260
Query: 61 agcaaaataattgtatcagcacatgaacaccttactcaggatccaataaatgtaactcat 120
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 261 agcaaaataattgtatcagcacatgaagatcttactcaggatccaataaatgtaactcat 320
Query: 121 aaatgtttaatctgtgatg-aaaaaaaaaggggttgatttgaattcataaggaaattctt 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aaatgtttaatctgtgatggaaaaaaaaaggggttgatttgaattcataaggaaattatt 380
Query: 180 ttgccaagcacagcagtctctagacattcatagataagttcccagttaggaggtttgaat 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ttgccaagcacagcagtctctagacattcatagataaattcccagttaggaggtttgaat 440
Query: 240 ttcatgaattcctatgcaatttctaagtcattttaaatatcatactatcacttcatatct 299
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ttcataaattcctatgcaatttctaagtcattttaaatatcatactatcatttcatatct 500
Query: 300 tcattcaccaagctcctaaacaaaagtacatctttccagtctcaaccacatgtctgctta 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tcattcaccaagctcctaaacaaaagtacatctttccagtcccaaccacatgtctgctta 560
Query: 360 gcaatgggtatttccacaaagcacattgttt 390
|||||| ||||||||||||||||||||||||
Sbjct: 561 gcaatgtgtatttccacaaagcacattgttt 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 791
Length adjustment: 9
Effective length of query: 381
Effective length of database: 782
Effective search space: 297942
Effective search space used: 297942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
