XXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCCACA
GAATTTGCAAAACAATTCATTTAGTAATTTTCAAGTGGCAGTGGTTGCTT
TTACTGTAGTAGCATAAAGAATGTCCTCGGAAGGACTCTGTATGTTGTGA
GAGGTTTCTGAAGTGGAAGTGAGGACAGAAATTGCTGATTCATTATGGAG
TGCTCCTTAAGCTCAAATAGATTGTGCTATGAGCACCACAAAGGCACTCC
AGCCTAACTCCCACCACGAGAATGCTAGAGAGCTTGTTAACACACATCCT
TTTAGCAATGGGATTGACTGGGTTTCCTAACCTTTGCCAATCTGATTGGT
AAGAAATGATATGCTAGTTTTTTTAAAAAATTTCAAAACTTTATTTTTCA
GTAACTGTTAGCGATTCATAAATTCCCCATTAAGTTACAGAATGTAAAGT
GTCGCAGTGGATGTTTTCCACAGCCCAGTGAAGCAGTGTGAAACACATGG
CAGGTGTCTGAGATACACGCTAGAGGTCTAAACTTAAAACACTCCAACTG
ATCAAAGCTTTTTCATTTTCATGGACCTCAATATATATATTTTTAGATTC
AATAAAGAAAAAATAACATGTAATTTCTCATATCTGTCTCAGAGAACAAT
TTATTAACAACTTTAGAAATCAGTTGTTCTAAGTCCAGAAAAACATCAGG
GATAAAAACACCACCAGGGAATCAGCTATCACTTTCTTTAAGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCG
CAATTCCTGATTTACTTCACATAATTTTAGAAAGTTTTAAGAGACTTTTG
TTGTTTTGCCAGAAAGATATAGTAAAGTTAGAATCAAGAAAAAAATGTGC
CCATTCCCCATAGAAAATAGTAAGTAAAGGCTGTATAATTAGGAATACAA
TGAGCTTTCACAATTACACTAAAAAGAGAAATAGGCTTGGGACAAACTTG
GGATCAAGGAAAAAATTCTAGGTCAGATCCAAGGATTAAGCCACAGGTGT
GCCCTATGATAAGAGGAGGCCATGTGAAACTGTTGCTTTGAACTTATAAT
GAAGTTATAGATTGAAACACTGCTTTGAACTTAATATCAACATCCTTCTG
CAACTCCCTCTTTGTGTAACATTTTATCCATGAGGTAATTTTCTAAAGAA
CTTTTGCCTAAGAAGATATAAGGCCAGAGAGAAGGAATAAAGTGTGGTAT
CTGGGACTCTGCCCCATCCATCCACCAAATGTATGTGTGTGGTTTGAGGG
GCTCTGCCCTATCCACCAAAAGTATGTATGTATGTATGTATGTATGTATG
TATGTATGTATNGAAGGNANGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTNNTTTNNTTTNTTTTTTTTTTTTTTTTTNTTTNNTTTTTNT
TTTTTTTTTTTTTTTTTTTTAATTTTTTTTT

Query= MSMg01no501_f22.b1 MSMg01no501_f22.b1 CHROMAT_FILE:
MSMg01no501_f22.b1 PHD_FILE: MSMg01no501_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:12 2005
         (582 letters)



>mm_chr15_38756444_38757425
          Length = 982

 Score = 1073 bits (555), Expect = 0.0
 Identities = 576/583 (98%), Gaps = 2/583 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaacaattcatttagtaattttcaagtggcagtggttgcttttactgtagtagcataaag 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aaacaattcatttagtaattttcaagtggcagcggttgcttttactgtagtagcataaag 260

                                                                       
Query: 61  aatgtcctcggaaggactctgtatgttgtgagaggtttctgaagtggaagtgaggacaga 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgtcctcggaaggactctgtgtgttgtgagaggtttctgaagtggaagtgaggacaga 320

                                                                       
Query: 121 aattgctgattcattatggagtgctccttaagctcaaatagattgtgctatgagcaccac 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aattgctgattcattatggagtgctccttaagctcgaatagattgtgctatgagcaccac 380

                                                                       
Query: 181 aaaggcactccagcctaactcccaccacgagaatgctagagagcttgttaacacacatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggcactccagcctaactcccaccacgagaatgctagagagcttgttaacacacatcc 440

                                                                       
Query: 241 ttttagcaatgggattgactgggtttcctaacctttgccaatctgattggtaagaaatga 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttagcaatgggattgacggggtttcctaacctttgccaatctgattggtaagaaatga 500

                                                                       
Query: 301 tatgctagtttttttaaaaaatttcaaaactttatttttcagtaactgttagcgattcat 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgctagtttttt-aaaaaatttcaaaactttatttttcagtaactgttagcgattcat 559

                                                                       
Query: 361 aaattccccattaagttacagaatgtaaagtgtcgcagtggatgttttccacagcccagt 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 aaattccccattaagttacagaatgtaaagtgttgcagtggatgttttccacagcccagt 619

                                                                       
Query: 421 gaagcagtgtgaa-acacatggcaggtgtctgagatacacgctagaggtctaaacttaaa 479
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaagcagtgtgaagacacatggcaggtgtctgagatacacgctagaggtctaaacttaaa 679

                                                                       
Query: 480 acactccaactgatcaaagctttttcattttcatggacctcaatatatatatttttagat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acactccaactgatcaaagctttttcattttcatggacctcaatatatatatttttagat 739

                                                      
Query: 540 tcaataaagaaaaaataacatgtaatttctcatatctgtctca 582
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcaataaagaaaaaataacatgtaatttctcatatctgtctca 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)