Query= MSMg01no502_j19.b1 MSMg01no502_j19.b1 CHROMAT_FILE:
MSMg01no502_j19.b1 PHD_FILE: MSMg01no502_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:42 2005
(463 letters)
>mm_chr15_59640230_59641092
Length = 863
Score = 843 bits (436), Expect = 0.0
Identities = 451/456 (98%)
Strand = Plus / Minus
Query: 8 ttctatgtctccatctcctcttcctctcccctcctcctgcataataacccactctgtggg 67
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 663 ttctatgcctccatctcctcttcctctcctctcctcctgcataataacccactctgtggg 604
Query: 68 gtttataagccccttaaggttccattacatatgatgaaacaaaataataaaatctatcag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gtttataagccccttaaggttccattacatatgatgaaacaaaataataaaatctatcag 544
Query: 128 gattaggaaggaatgtaatgccaccccacgttgataccgtatcaacctccggaagtaaat 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aattaggaaggaatgtaatgccaccccacgttgataccgtatcaacctccggaagtaaat 484
Query: 188 agactaatcttaatgccaggaacttccttatagcatagcctccttggagaccaaaaaaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agactaatcttaatgccaggaacttccttatagcatagcctccttggagaccaaaaaaag 424
Query: 248 aagacactgtcacttgttctggtgaccctgggagaggccactcaacgttaccttctacat 307
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaacactgtcacttgttctggtgaccctgggagaggccactcaacgttaccttctacat 364
Query: 308 ctagtccatcttccaggccctctgccttctatcctttgagtgactatgggccaaatctcc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctagtccatcttccaggccctctgccttctatcctttgagtgactatgggccaaatctcc 304
Query: 368 tcctccctgctggtcccctcatccttcgctgcagttccctgcttaccaccgttgtattcc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcctccctgctggtcccctcatccttcgctgcagttccctgcttaccaccgttgtattcc 244
Query: 428 tgccatgctttgcacgactgaactatgtcctcccta 463
||||||||||||||| ||||||||||||||||||||
Sbjct: 243 tgccatgctttgcacaactgaactatgtcctcccta 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_j19.g1 MSMg01no502_j19.g1 CHROMAT_FILE:
MSMg01no502_j19.g1 PHD_FILE: MSMg01no502_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:42 2005
(435 letters)
>mm_chr15_59587363_59588193
Length = 831
Score = 779 bits (403), Expect = 0.0
Identities = 426/435 (97%), Gaps = 4/435 (0%)
Strand = Plus / Plus
Query: 1 actctgcagctcaggctggcctcaaatttgagactgtctcctgctttacctctacagtgt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 actctgcagctcaggctggcctcaaatttgagacggtctcctgctttacctctacagtgt 260
Query: 61 tagcatgagaggtattagtccccaaaactggcttaaagcattagcttaaacaatttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcatgagaggtattagtccccaaaactggcttaaagcattagcttaaacaatttattt 320
Query: 121 caactgattttagctaagcaggtgatatttttacccctgtctccatagttgctagccatg 180
|||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 caaccaattttagctaagcaggtgatatttttacccctgcctccatagttgctagccatg 380
Query: 181 taaagtgcaatattatttctttcacattttctgaaggtttttttttttctttctttttga 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 381 taaagtgcaatattatttctttcacattttctgaaggtttttttttt-c---ctttttga 436
Query: 241 gagctgtctgtacccccagcaggaatatttcctgtctccattgctacattttcctggcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagctgtctgtacccccagcaggaatatttcctgtctccattgctacattttcctggcga 496
Query: 301 ggcagccaacaggatgatgtcgaactctagccgtcgacagcttgtgatgcagagctgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggcagccaacaggatgatgtcgaactctagccgtcgacagcttgtgatgcagagctgtta 556
Query: 361 cacttggtaatttgccttgaactttccgtactttggaggctctttttggctcaggcctct 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 557 cacttggtaatttgccttgaactttccgtactttggaggctctctttggctcaggcctct 616
Query: 421 catcctggtttctga 435
|||||||||||||||
Sbjct: 617 catcctggtttctga 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 831
Length adjustment: 9
Effective length of query: 426
Effective length of database: 822
Effective search space: 350172
Effective search space used: 350172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
