Query= MSMg01no505_c05.b1 MSMg01no505_c05.b1 CHROMAT_FILE:
MSMg01no505_c05.b1 PHD_FILE: MSMg01no505_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:58 2005
(683 letters)
>mm_chr15_100324311_100325393
Length = 1083
Score = 1282 bits (663), Expect = 0.0
Identities = 675/679 (99%)
Strand = Plus / Plus
Query: 5 gaattcggctttctccattaaagccacatcctagaagacacagagctttgtgagagacct 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcggcttcctacattaaagccacatcctagaagacacagagctttgtgagagacct 264
Query: 65 ggaacatgatgccgcattaactctcctcggaaggatatcgccatttataactctcccgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 ggaacatgatgccgcattaactctcctcggaaggatatcgccatttataactctcccaca 324
Query: 125 caccaacaccctggttttggatatctgtaaaatttaaagccaccaaagaaaaggagaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caccaacaccctggttttggatatctgtaaaatttaaagccaccaaagaaaaggagaatg 384
Query: 185 tgaatcggctggcgttctaaccacgaaaactggaggacacggggaacagtgtcatctctt 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaatcggctggggttctaaccacgaaaactggaggacacggggaacagtgtcatctctt 444
Query: 245 ggggataacttctaacctttcatactgaagaatggtttctgtgtcacactgtcactctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggataacttctaacctttcatactgaagaatggtttctgtgtcacactgtcactctca 504
Query: 305 acccttctaaaagggtgaatcaagaccatagcactcaaaggatggatggcaggcggctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acccttctaaaagggtgaatcaagaccatagcactcaaaggatggatggcaggcggctgc 564
Query: 365 gtgtttaggcctgcgaaaaggatcaagctagcacccgggacaagtgatgctctcattttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtttaggcctgcgaaaaggatcaagctagcacccgggacaagtgatgctctcattttt 624
Query: 425 gcacacaacgccagaaaaaatgggagacatcgggaatcagagcagaagggacatgccaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcacacaacgccagaaaaaatgggagacatcgggaatcagagcagaagggacatgccaag 684
Query: 485 tcaccagttcccctcagcaccgctgaagaacccttccgctctcaacccatggattcccgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaccagttcccctcagcaccgctgaagaacccttccgctctcaacccatggattcccgc 744
Query: 545 taaccttcccgctcatttccatcttctgcagtccccacagccttccacatcctcctgcct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taaccttcccgctcatttccatcttctgcagtccccacagccttccacatcctcctgcct 804
Query: 605 gctactcacaaattcccaaccactcctcccacattttcctccaggccccctccccttcct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gctactcacaaattcccaaccactcctcccacattttcctccaggccccctccccttcct 864
Query: 665 tcacttccctccatcctac 683
|||||||||||||||||||
Sbjct: 865 tcacttccctccatcctac 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_c05.g1 MSMg01no505_c05.g1 CHROMAT_FILE:
MSMg01no505_c05.g1 PHD_FILE: MSMg01no505_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:58 2005
(658 letters)
>mm_chr15_100455248_100456304
Length = 1057
Score = 1104 bits (571), Expect = 0.0
Identities = 637/667 (95%), Gaps = 21/667 (3%)
Strand = Plus / Minus
Query: 1 aaggtcagcctggaccacatagtgacttccaggacagccaggactttgcagagagacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aaggtcagcctggaccacatagtgacttccaggacagccaggactttgcagagagacctc 791
Query: 61 tctcaccacccccacctccactcccaaattaaaaaaagggttgggctggccttgatactg 120
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 790 tctcaccatccccacctccactcccaaa-taaaaaaagggttgggctggccttgatactg 732
Query: 121 gaaagcattcctgacagcccatctctgctttttcggttgtgggaacaagggcaattcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaaagcattcctgacagcccatctctgctttttcggttgtgggaacaagggcaattcact 672
Query: 181 cacgaggttcttgttgttctctgaccctttactcttgaccccttttgccccagctcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cacgaggttcttgttgttctctgaccctttactcttgaccccttttgccccagctcacag 612
Query: 241 ggactgatgtcacttcacccatgcaccatggaaccacattagcgttccttcgacagctct 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 611 cgactgatgtcacttcacccatgcaccgtggaaccacattagcgttccttcgacagctct 552
Query: 301 gatg-gagtagccctttctaggcccagtcctagtgccactcaatggcttccaccaccccc 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gatgagagtagccctttctaggcccagtcctagtgccactcaatggcttccaccaccccc 492
Query: 360 tggcacaaataccaaccaggcccctctgctgcttttctgatcctgggatgttcagctggt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 491 tggcacaaataccaaccaggcccctctgctgcttttctgatcctgggatgttcagctgat 432
Query: 420 ggaacctcttgaggcgtggtagggtgtgaggcgtggtagggtgtgaagcaggtcctgccc 479
|||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 431 ggaacctc-taaggcgtggtagggtgtgagacgtggtagggtgtgaagcaggtcctgccc 373
Query: 480 tgctctgtcccccgcgtgcctagcatggctcctggcaaagcaggtgggccacagtgctga 539
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 372 tgctctgtcccccgcgtgcctagcatggctcctggcaaagcagttgggccacagtgctga 313
Query: 540 gagtttctctcctgcccctttaatttccccctccctctgctcattcattc--tctc-tct 596
||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| | |
Sbjct: 312 gagtttctctcctacccctttaatctccccctccctctgctcattcattcattctcat-t 254
Query: 597 ctctccctccctctctctctctctctctgcccccc------cttcctctctcctctgcac 650
|||| | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 ctct-------t-tctctctctctctctgcccccccccccacttcctctctcctctgcac 202
Query: 651 ccccccc 657
|||||||
Sbjct: 201 ccccccc 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
