Query= MSMg01no505_l10.b1 MSMg01no505_l10.b1 CHROMAT_FILE:
MSMg01no505_l10.b1 PHD_FILE: MSMg01no505_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:41 2005
(624 letters)
>mm_chr15_60981987_60983008
Length = 1022
Score = 1067 bits (552), Expect = 0.0
Identities = 585/598 (97%), Gaps = 6/598 (1%)
Strand = Plus / Minus
Query: 6 gaattctacatttgcttcttaagtgg-aaagggcatggtttgctcttttctctattcaca 64
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 595 gaattctacatttgattcttaagtggaaaagggcatggtttgctcttttctctattcaca 536
Query: 65 aaaatctcttttctctatatacaaaatcaatacttgataataactgtatgatttgagtga 124
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 aaaatctcttttctctatattcaaaatcaatacttgataataactgtgtgatttgagtga 476
Query: 125 accacagattctttcaaacaattcccattttcatgaactggtgctccctaaagcagctcc 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 475 accacagattctttcaaacaattcccattttcatgacctggtgctccctaaagcagctcc 416
Query: 185 cacaacacaatgggaacaaactccaaacttgacccatcccattccttcttcctacaccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cacaacacaatgggaacaaactccaaacttgacccatcccattccttcttcctacaccca 356
Query: 245 tggatactgtcaccctggggaatgtttctctagagggttgcagggagggggccaatgtca 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 355 tggatactgtcaccctggggaatgtttctctagagggttgcaggga---ggccaatgtca 299
Query: 305 ggcagatagacatcaaggctgacttactctttcagtggatttactacaatgggaaaacgg 364
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 298 ggcagatagacgtcaaggctgacttactctttcagtggatttactacaatgggaaaacag 239
Query: 365 gaatgggagattgaaataaaagcaatgcaattc--tttttttttccattttttattaggt 422
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 238 gaatgggagattgaaataaaagcaatgcaattctttttttttttccattttttattaggt 179
Query: 423 atttagctcatttacattttcaatgctataccaaaagtcccccatatccacccaccccca 482
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atttagctcatttacatttccaatgctataccaaaagtcccccatatccacccaccccca 119
Query: 483 ctcccctgcccacccactccccctttttggccctggtgttcccctgtactggggcatata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ctcccctgcccacccactccccctttttggccctggtgttcccctgtactggggcatata 59
Query: 543 aagtttgcaagtccaatgggcctctctttccagtgatggccgactaggccatcttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 aagtttgcaagtccaatgggcctctctttccagtgatggccgactaggccatcttttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1022
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1012
Effective search space: 621368
Effective search space used: 621368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_l10.g1 MSMg01no505_l10.g1 CHROMAT_FILE:
MSMg01no505_l10.g1 PHD_FILE: MSMg01no505_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:41 2005
(239 letters)
>mm_chr15_60837534_60838171
Length = 638
Score = 385 bits (199), Expect = e-111
Identities = 205/207 (99%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 31 aagtctcttacttagccaaggagctctggactttgatagcttcttagaggagaattgact 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aagtctcttacttagccaaggagctctggactttgatagcttcttagaggagaattgact 290
Query: 91 ttgtataagtgtgtagtccctagtaagttggcctcactctggtggaagaccacatgtcca 150
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 291 ttgtataagtgtgtagtccctagtaagttggcctcactctggtggaagaccacacgtcca 350
Query: 151 aaaattggtcttgataggtctaataaaaataaagggataaagtcacatagttcaggtggg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaaattggtcttgataggtctaataaaaataaagggataaagtcacatagttcaggtggg 410
Query: 211 tagggaaggggttgtgtggggttggat 237
|||||||||||||| ||||||||||||
Sbjct: 411 tagggaaggggttg-gtggggttggat 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
