Query= MSMg01no508_d20.b1 MSMg01no508_d20.b1 CHROMAT_FILE:
MSMg01no508_d20.b1 PHD_FILE: MSMg01no508_d20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:05 2005
(667 letters)
>mm_chr15_26689195_26690261
Length = 1067
Score = 592 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Minus
Query: 362 cactattgggtatacaagcgaaggattttacattggcatccctcatacacatagccattc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 cactattgggtatacaagcgaaggattttacattggcatccctcatacacatagccattc 1008
Query: 422 ttattactggctacagtattcaaggtataatgaggctggatgtctttcagtccttgaatg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ttattactggctacagtattcaaggtataatgaggctggatgtctttcagtccttgaatg 948
Query: 482 gataaagaatacattcatatccacacaattgagggtttttaaaatatccaaccatgaaaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 gataaagaatacattcatatccacacaattgagggtttttaaaatatccaaccatgaaaa 888
Query: 542 acaaaatgatatcctttattataaatacatatgcaaatatagatcatcatattatggaag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 acaaaatgatatcctttattataaatacatatgcaaatatagatcatcatattatggaag 828
Query: 602 ctgcatgtttattacaatatatagattagtggatagaaaggaaagggtatgagtgtgcat 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ctgcatgtttattacaatatatagattagtggatagaaaggaaagggtatgagtgtgcat 768
Query: 662 atggtc 667
||||||
Sbjct: 767 atggtc 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_d20.g1 MSMg01no508_d20.g1 CHROMAT_FILE:
MSMg01no508_d20.g1 PHD_FILE: MSMg01no508_d20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:05 2005
(588 letters)
>mm_chr15_26539675_26540662
Length = 988
Score = 1029 bits (532), Expect = 0.0
Identities = 574/588 (97%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 cagaaaactatgaaatttgacaatcccacttttatttattcattacatgcagtgatttga 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 cagaaaactatgaaatttgacaatcccacttttatttattcactacatgcagtgatttga 260
Query: 61 aacaaagacattatagaaattgatttgcctcctgaagactgctttcttctaattctttgt 120
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 aacaatgacattatagaaattgatttgcttcctgaagactgctttcttctaattctttgt 320
Query: 121 tgttgttgaatggaatttttaaaagatttacttatttattatgtatacagtgttctgtct 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgttgagtggaatttttaaaagatttacttatttattatgtatacagtgttctgtct 380
Query: 181 gcatgaatgcctgcatgccaagagagggcatcaaatctcattataggtggttgggaactg 240
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatgtatccctgcatgccaagagagggcatcaaatctcattataggtggttgggaactg 440
Query: 241 ccatgtggttgctgcgaattgaactcaggacctctggaaaagtggccatcaccccagctc 300
|||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 441 ccatgtggttgctgtgaattgaactcaggacctctgaaaaagtggccatcactccagctc 500
Query: 301 cttcttttcattattaagggtttttttcatattctcaaatatttaacaaatcaaacacat 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 cttcttttcattattaagggtttttt-catattctcaaatatttaacaaatcaaacacat 559
Query: 361 tgtaggctatattcatggcctttttattgattcaagaatttgctgagctcatattatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtaggctatattcatggcctttttattgattcaagaatttgctgagctcatattatgtg 619
Query: 421 gggacatacagcaggaaacagaagatgccattttttaatatatagaacttctatttgtaa 480
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 gggacatacagcaggaaacagaagatgccatcttttaatatatagaacttctatttgtac 679
Query: 481 aagaaaaatagaataagccagccaactaacatgtgtgattgctgtgattaaaatgttatg 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagaaaaagagaataagccagccaactaacatgtgtgattgctgtgattaaaatgttatg 739
Query: 541 aagaatataaagtgcaacaaataatgtgggagcttattttttaccaaa 588
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 740 aagaatataaagtgcaacaaataatgtgggagcttattttttgccaaa 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
