Query= MSMg01no514_k04.b1 MSMg01no514_k04.b1 CHROMAT_FILE:
MSMg01no514_k04.b1 PHD_FILE: MSMg01no514_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:36 2005
(676 letters)
>mm_chr15_96674407_96675483
Length = 1077
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 23 tgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgcacatgtgggtttagccagagctataat 82
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 905 tgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgcacgtgtgggtttagccagagctataat 846
Query: 83 tacagtgttactaaggatgtgaggtgtattagttaagattttgtcagcacttttattgtt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tacagtgttactaaggatgtgaggtgtattagttaagattttgtcagcacttttattgtt 786
Query: 143 aatacttagcgagattagtcattttatttgctcccttttaatgccaaaaatggaagacag 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aatacttagcgagattagtcattttatttgctcccttttaatgccaaaaatggaagacag 726
Query: 203 ctgtttgtgcactaaaatcccccttttaaaagatagttctttctgtttatcaggcatatt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ctgtttgtgcactaaaatcccccttttaaaagatagttctttctgtttatcaggcatatt 666
Query: 263 ttgcccctggggaaatgtatttttaaattgcaccgtcaaatgaagtgagacggaaggatt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttgcccctggggaaatgtatttttaaattgcaccgtcaaatgaagtgagacggaaggatt 606
Query: 323 actttagctgttacttctaaataataagaaaactttaacatgggggaacgctgctaaggg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 actttagctgttacttctaaataataagaaaactttaacatgggggaacgctgctaaggg 546
Query: 383 ctggcgggaaatatctgacagcactcataagtactcagccctccctg-ccccccccccat 441
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 545 ctggcgggaaatatctgacagcactcataagtactcagccctccctgcccccccccccat 486
Query: 442 tggaaggctcccttggaacactcagtccctagattcatcctaagttcaatggtagacaca 501
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tggaaggcttccttggaacactcagtccctagattcatcctaagttcaatggtagacaca 426
Query: 502 tggaaaaagaaaaggctaggattggtggcttgcatcagattcagcctccaccaggacagg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tggaaaaagaaaaggctaggattggtggcttgcatcagattcagcctccaccaggacagg 366
Query: 562 aagccatcttttgtgagagagccttagtcaatcaaatccaaaccctgtgcttgttgctac 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aagccatcttttgtgagagagccttagtcaatcaaatccaaaccctgtgcttgttgctac 306
Query: 622 gcaggggttactcatcttccaactataaacttccagaatttgtttccactagcat 676
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gctggggttactcatcttccaactataaacttccagaatttgtttccactagcat 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1077
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1067
Effective search space: 710622
Effective search space used: 710622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_k04.g1 MSMg01no514_k04.g1 CHROMAT_FILE:
MSMg01no514_k04.g1 PHD_FILE: MSMg01no514_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:36 2005
(663 letters)
>mm_chr15_96518279_96519341
Length = 1063
Score = 1243 bits (643), Expect = 0.0
Identities = 658/663 (99%)
Strand = Plus / Plus
Query: 1 agttcaggaacctcaaggcgggtaaaacagccccaagctttggaatttggcctgaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttcaggaacctcaaggcgggtaaaacagccccaagctttggaatttggcctgaaattc 260
Query: 61 atttggaaccttgctccctcacaggaggtttgggaagtctctccacactgatcggctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggaaccttgctccctcacaggaggtttgggaagtctctccacactgatcggctgtg 320
Query: 121 aacaggatcctggttgtcatggcacctctcaggatgcctgcctctcagcatcccctggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaggatcctggttgtcatggcacctctcaggatgcctgcctctcagcatcccctggca 380
Query: 181 tatggtagccaggactctttccaggacttcaagcggaagtgcagagtctttgacgagcag 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tatggtagccaggactctttccaggacttcaagcggaggtgcagagtctttgacgagcag 440
Query: 241 gtgaggttctggacttgatgacaagtaagcagcatgggggagagtcttctcactgccttt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gtgaggttctggacttgatgacaagtaagcagcatgggggagtgtcttctcactgccttt 500
Query: 301 gtgtctacacagtccccaggggcttcatcttgggacagaactgaccattggttgtaccca 360
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcgtctacacagtccccaggggtttcatcttgggacagaactgaccattggttgtaccca 560
Query: 361 atgtatgtagcactaccagacgtcttccagtctgcaagagtctttaatggcagacatacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtatgtagcactaccagacgtcttccagtctgcaagagtctttaatggcagacatacc 620
Query: 421 ttgcctatgaattcagtcacatatacaatacaagactgtaacaaaaaccatgtgtgtcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcctatgaattcagtcacatatacaatacaagactgtaacaaaaaccatgtgtgtcac 680
Query: 481 atttcttctggcccctgcctcaaactcaaaacatgtagtttcaagagccagataaccaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttcttctggcccctgcctcaaactcaaaacatgtagtttcaagagccagataaccaat 740
Query: 541 tgacgattctacttgcttccctccaccacttaatggaattatgtatattaattagacctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgacgattctacttgcttccctccaccacttaatggaattatgtatattaattagacctt 800
Query: 601 agacaatacgcttgatgagcaaagtacctcattatttaaaaatatattcaccatacaccg 660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 801 agacaatacgcttgatgagcaaagtacctcattatttaaaaatatgttcaccatacaccg 860
Query: 661 tta 663
|||
Sbjct: 861 tta 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
