Query= MSMg01no516_i04.b1 MSMg01no516_i04.b1 CHROMAT_FILE:
MSMg01no516_i04.b1 PHD_FILE: MSMg01no516_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:16 2005
(651 letters)
>mm_chr15_100980996_100982044
Length = 1049
Score = 1122 bits (580), Expect = 0.0
Identities = 599/606 (98%), Gaps = 2/606 (0%)
Strand = Plus / Minus
Query: 46 tatatatatattctttgtgtgtgtgtttgtttaaggtctcactgtgtggcctcgggcctg 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tatatatatattctttgtgtgtgtgtttgtttaaggtctcactgtgtggcctcgggcctg 743
Query: 106 gcactcactatgcagaacaggctgtggcttgcagcaatcctgccttcctcctgagttctg 165
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 742 gcactcactatgcagaacaggctgtggcttgcagcaatcctgccttcctcctgagtgctg 683
Query: 166 ggggtgtaactgatcctccaggtccagcttcggttctgtgttttagaggtcttgccatgc 225
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 682 ggggtgtaactgatcctccaggtccagcttcggttctgtgtttaagaggtcttgccatgc 623
Query: 226 tgttgtacatacacacacttgcaaacacacacacagagacatgtctgtcccactgcttcc 285
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgttgtacat--acacacttgcaaacacacacacagagacatgtctgtcccactgcttcc 565
Query: 286 aatgctcacacaactgtacaactgttactacgaccagctctagagcagttttcctcactt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatgctcacacaactgtacaactgttactacgaccagctctagagcagttttcctcactt 505
Query: 346 gcttttatccatcacctccacaaatgctttctgtgttgttcagataggaacttcctgtgt 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcttttatccatcacctccacaaatgctttctgtgttgttcagataggaacttcctgtgt 445
Query: 406 gtttcagactgtcctccatctaagccttgggaacctcacttcactctatatacatatata 465
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 gtttcagactgtcctccatctaagccttgagaacctcacttcactctatatacatatata 385
Query: 466 tacatttatatacatactcagcacatatatacatacagatatacacatatacaaagacag 525
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacatttatatacatacccagcacatatatacatacagatatacacatatacaaagacag 325
Query: 526 aatttctttgtagccatgtttgtcctggaagtcactctgtagatcaggctggtttcaagc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatttctttgtagccatgtttgtcctggaagtcactctgtagatcaggctggtttcaagc 265
Query: 586 tcagagtttctgcctcccaagatctggggttaaaggtgtaggccattccacctggcttga 645
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 tcagagtttctgcctcccaagatctggcgttaaaggtgtaggccattccacctggcttga 205
Query: 646 cttcat 651
||||||
Sbjct: 204 cttcat 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1049
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1039
Effective search space: 665999
Effective search space used: 665999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_i04.g1 MSMg01no516_i04.g1 CHROMAT_FILE:
MSMg01no516_i04.g1 PHD_FILE: MSMg01no516_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:16 2005
(671 letters)
>mm_chr15_100852843_100853913
Length = 1071
Score = 1251 bits (647), Expect = 0.0
Identities = 665/671 (99%)
Strand = Plus / Plus
Query: 1 aaggcaagcctgatctaccagacaagttcaaggacagccagtgtttgtttgtttgtgttt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcaagcctgatctaccagataagttcaaggacagccagtgtttgtttgtttgtgttt 260
Query: 61 gttttaatgtctatggatgtagctcagtagtgaaacacttgcccagcaagcacaaggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttaatgtctatggatgtagctcagtagtgaaacacttgcccagcaagcacaaggcct 320
Query: 121 gggtttaatctctacttacaaaacatgcaagagaggcacctgtgtgtgctgaacccatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtttaatctctacttacaaaacatgcaagagaggcacctgtgtgtgctgaacccatgc 380
Query: 181 agggcagacacagaattgaggcctagtctaagagagatcaaagaacagcagatgacaccg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 agggcagacacagaattgaggcctagtctaagagagatcaaagaacagcagatgactccg 440
Query: 241 agatgacacgagagaccgagatgacacgagagacagctttcccctctggctttgagacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatgacacgagagaccgagatgacacgagagacagctttcccctctggctttgagacat 500
Query: 301 cagtgaaagtaaacttccaagctcccataagaaagaagatcttagcccatcccacaatcg 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 cagtgaaagtaaacttccaagctcccataagaaagaagatcttaatccatcccacaatcg 560
Query: 361 ggtataaatagaatagactgcgatgtgaaagaaagtcctctgcaaggatccccaagcaga 420
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtataaatagaacagactgtgatgtgaaagaaagtcctctgcaaggatccccaagcaga 620
Query: 421 cattcccagatatgtctgggtaaaggtatgctcaggccaagtggccctgaggagccccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattcccagatatgtctgggtaaaggtatgctcaggccaagtggccctgaggagccccat 680
Query: 481 atcctgctcaggtcaagcccaagcaggcttgtatccatggtggctaatgtccattgtgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcctgctcaggtcaagcccaagcaggcttgtatccatggtggctaatgtccattgtgaa 740
Query: 541 gggtcatcctgatagaaggagcaaggtaagtttgctcttgggagaacaggaaagtcttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gggtcatcctgatagaaggagcaaggtaagtttgctcttgggagaacaggaaagtcttgg 800
Query: 601 cccacgtctaggctcacagacatcggtgacctatctgttaggatcctgcctgtcatcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cccacgtctaggctcacagacatcggtgacctatctgttaggatcctgcctgtcatcttt 860
Query: 661 gtgctgcagac 671
|||||||||||
Sbjct: 861 gtgctgcagac 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
