CGGGGNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCTGTTTATCTCTGTTCCCCAAGCTAATTGGGTTATT
AGGTTGTTTGGAGTCTAAGTTCTTGAATATTTTGGATATTAGCCTTCTAC
CAGTTGTAGGGTGTGTGAAGATATTTTCCCAATCTGGAGGTTGCTGATTA
GTTCTATTGACAGTGTCCTTTGCTTTTCAGTTTCATAAGCTCCCATTTGT
CAATGGCCTGAGCCCTTTGTGTTTTGTTCAGAAAAATTTCCCCTATGCCA
ATGTGTTTGATGTTATTTCCCACTTTCTCCTCTGTTAGATTCAGTGTATC
TCGTTTTATGTGAAGATCCTTGATCCATTTGGACTTGAACTTTGTACAAG
GTGATAAATATGGATCAATTTTATTCTTCTACATGCAAATTGCTAGATAG
ATCAGCACCATTTGTTGAAGATGCTTTCATTTTCCCACTGTATGGTTTTG
GCTTCTTTGTCAAAGATCAAGTGTCCATAGGTGTGTGGGTTTATTTCTGG
TTCTTTAAGTCTATACCATTGATTGACCTGTCTATTTCTGTACCAATACT
GTGCTTTTTTTCACTATTGTTCTATAGTAGAGCTTGAGATCAGAGTTATT
GATTCCCTCCATAGNTCTTTTATTGTTAAGAAATGTTTTTGCCAATTTTT
TGTTTTGTTTTTTCATATAAAGTTGAGAGGTGTTTTTTCCATTTCTGTGA
GAATGTGTTGGATT

TTATTTTCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTGCCTACTTAGTAC
CATGTTGCTAGCTTATAAACATAAAGTTTACGGACAGAGAGCTCAACAAT
GGCGTTGTAATAAATTTTGCCTCTACAACTAGAAGTTGAAGCAAAATATA
ATTAAGAAATGGTCACTGATTAGAGAAATATATATTATACTGCTTGAAAA
TAGTTGTACTCAGCTAGCCTTTTCTAGTGAACTCCAGAAAAACCACAGCT
ATTAATATGCTATTATTAAATATCATTATTAAGTTATTAAACATTAAATT
TTTATTATTAAATTAATATAAATTATTAAATATTAAATATGTAATAGAAA
ATGTCATAGCTCACAGGAAACAGAATAGATATTTGAGTTTTAACAGTTTC
TAATAAGAAAGGCTCCATGAACCTTTACTGTTTTCCACTCACACACTAAA
GGGCATAATAGTAAAGTGTGTACTCTAGACTCTAAATGGCTGACATAAGA
AGGATACACTATACCCACAAGACTTAAAGTGGAATATAGCCTAGATCCAA
AAGGTGTGACTGAACAGAGTACTCTAAACTCAAGAGATTCATTCAAGATA
CAAGATCAAGATGGAATTGTATTTACTTGGAAGAAACTCACAATCAAAAT
TACAAAATCAAAGCAATCATCCTTATTTTTATTGCCCTTAAACAAAATAA
ATGGTTAGATGGGAAAAT

Query= MSMg01no516_o23.g1 MSMg01no516_o23.g1 CHROMAT_FILE:
MSMg01no516_o23.g1 PHD_FILE: MSMg01no516_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:51 2005
         (556 letters)



>mm_chr15_28953157_28954112
          Length = 956

 Score =  868 bits (449), Expect = 0.0
 Identities = 449/449 (100%)
 Strand = Plus / Minus

                                                                       
Query: 108 gcaaaatataattaagaaatggtcactgattagagaaatatatattatactgcttgaaaa 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gcaaaatataattaagaaatggtcactgattagagaaatatatattatactgcttgaaaa 897

                                                                       
Query: 168 tagttgtactcagctagccttttctagtgaactccagaaaaaccacagctattaatatgc 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 tagttgtactcagctagccttttctagtgaactccagaaaaaccacagctattaatatgc 837

                                                                       
Query: 228 tattattaaatatcattattaagttattaaacattaaatttttattattaaattaatata 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 tattattaaatatcattattaagttattaaacattaaatttttattattaaattaatata 777

                                                                       
Query: 288 aattattaaatattaaatatgtaatagaaaatgtcatagctcacaggaaacagaatagat 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 aattattaaatattaaatatgtaatagaaaatgtcatagctcacaggaaacagaatagat 717

                                                                       
Query: 348 atttgagttttaacagtttctaataagaaaggctccatgaacctttactgttttccactc 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atttgagttttaacagtttctaataagaaaggctccatgaacctttactgttttccactc 657

                                                                       
Query: 408 acacactaaagggcataatagtaaagtgtgtactctagactctaaatggctgacataaga 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acacactaaagggcataatagtaaagtgtgtactctagactctaaatggctgacataaga 597

                                                                       
Query: 468 aggatacactatacccacaagacttaaagtggaatatagcctagatccaaaaggtgtgac 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aggatacactatacccacaagacttaaagtggaatatagcctagatccaaaaggtgtgac 537

                                        
Query: 528 tgaacagagtactctaaactcaagagatt 556
           |||||||||||||||||||||||||||||
Sbjct: 536 tgaacagagtactctaaactcaagagatt 508


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)