Query= MSMg01no517_d19.b1 MSMg01no517_d19.b1 CHROMAT_FILE:
MSMg01no517_d19.b1 PHD_FILE: MSMg01no517_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:15 2005
(215 letters)
>mm_chr15_99316810_99317424
Length = 615
Score = 315 bits (163), Expect = 1e-90
Identities = 182/191 (95%), Gaps = 6/191 (3%)
Strand = Plus / Plus
Query: 25 gtgtgtgtgtgtgtgcatgtgcgcgtgcgcgtgtgcgtgtgtacaagtgtgtgcacatgc 84
||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 231 gtgtgtgtgtgtgtg--tgt----gtgtgcgtgtgcgtgtgtacaagtgtgtgcacatgc 284
Query: 85 atgtggagattggagaccaccctcaggtgctgcctaccttggcttcttttagattgtttt 144
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 285 atgtggagattggagaccaccctcaggtgctgcctacattggtttcttttagattgtttt 344
Query: 145 atgcttagggatattttacctgtatgtgtgtctatgcaccacatgcatgcctggtagctg 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atgcttagggatattttacctgtatgtgtgtctatgcaccacatgcatgcctggtagctg 404
Query: 205 tatcattagag 215
|||||||||||
Sbjct: 405 tatcattagag 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no517_d19.g1 MSMg01no517_d19.g1 CHROMAT_FILE:
MSMg01no517_d19.g1 PHD_FILE: MSMg01no517_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:15 2005
(211 letters)
>mm_chr15_99475424_99476034
Length = 611
Score = 369 bits (191), Expect = e-107
Identities = 206/211 (97%)
Strand = Plus / Minus
Query: 1 gaccatcctgcctttatctctagtactgagcttttagtgtacagtaccatgcctgcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 411 gaccatcctgcctttatctctagtactgagcttttagtgtacagtaccacgcctgcttga 352
Query: 61 aaatagtttttgcctgctgtagtggtgcacacctttaattccagtgacaggcatatctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 351 aaatagtttttgcctgctgtagtggtgcacacctttaattccagtgacaggcagatctct 292
Query: 121 gggttccagaacaggtcttaaaaacgagaaaagccactcctcccattttcaacatcatgg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 291 gggttccagaacaggtcttaaaaacaagaaaagccactcctcccattttcaacatcatgg 232
Query: 181 ttgccacagaaactgcttgtctgagtccctt 211
||||||||||||||||| ||| |||||||||
Sbjct: 231 ttgccacagaaactgctcgtccgagtccctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
