Query= MSMg01no518_e21.b1 MSMg01no518_e21.b1 CHROMAT_FILE:
MSMg01no518_e21.b1 PHD_FILE: MSMg01no518_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:40 2005
(649 letters)
>mm_chr15_75337127_75338175
Length = 1049
Score = 1232 bits (637), Expect = 0.0
Identities = 646/649 (99%)
Strand = Plus / Plus
Query: 1 ttgcattctgaacttgtaaccctatgatgtatacccaccccttggccttgttatactcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcattctgaacttgtaaccctatgatgtatacccaccccttggccttgttatactcct 260
Query: 61 gaacactgtgatgacacccccactttctcttgatgtattcttacacttatatatcccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacactgtgatgacacccccactttctcttgatgtattcttacacttatatatcccaca 320
Query: 121 gacaaccttgagccctgagtccccctctttactgtccagatgttaacacctgttttccat 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gacaaccttgagccctgagtccccctcttttctgtccagatgttaacacctgttttccat 380
Query: 181 caaccctaacacttcctcagtaaaagagacctcaaaggcagtgaaggaccgcattctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaccctaacacttcctcagtaaaagagacctcaaaggcagtgaaggaccgcattctgaa 440
Query: 241 atctcaatttagtgagaggcacctgtctggccagtgtaaataaaccttgctcaatcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctcaatttagtgagaggcacctgtctggccagtgtaaataaaccttgctcaatcaaac 500
Query: 301 agttgtgaaatatttctttgtttccaaggtctagcacttggtttctctggaatgtgaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttgtgaaatatttctttgtttccaaggtctagcacttggtttctctggaatgtgaggc 560
Query: 361 aaagccatttcatggaggaagggctcctttaaggactatctgggcagacattcagtgagt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 aaagccatttcatggaggaagggctcctttaaggattatctgggcagacattcagtgagt 620
Query: 421 gttcaggtatgtttggtgcattccccaaggggaagagatcatgtaaccttagcccagatg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 gttcaggtatgtttggtgcattccccaaggggaagagatcatgtaaccttagcccagagg 680
Query: 481 tagagatgccagcttcaggtccaaggtgttcagggctcaaagtgggttgaccatgggaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagagatgccagcttcaggtccaaggtgttcagggctcaaagtgggttgaccatgggaga 740
Query: 541 gctctgacctcgatactaccttcagactgaaccatgccctccccagaccatagccttctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctctgacctcgatactaccttcagactgaaccatgccctccccagaccatagccttctg 800
Query: 601 ggccacagtttgccacaataacacctatggcctgcagagtcatcttcag 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggccacagtttgccacaataacacctatggcctgcagagtcatcttcag 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_e21.g1 MSMg01no518_e21.g1 CHROMAT_FILE:
MSMg01no518_e21.g1 PHD_FILE: MSMg01no518_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:40 2005
(571 letters)
>mm_chr15_75516108_75517078
Length = 971
Score = 992 bits (513), Expect = 0.0
Identities = 558/573 (97%), Gaps = 3/573 (0%)
Strand = Plus / Minus
Query: 1 tttctcactaagtagcccaggatggcctttctgcttctgcatccccagagctaggactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tttctcactaagtagcccaggatggcctttctgcttctgcatccccagagctaggactct 890
Query: 61 acagatgccctccactacgccccgctctttgtagcttccttcctttctctttttgttgtt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 acagatgccctccactactccccgctctttgtagcttccttcctttctctttttgttgtt 830
Query: 121 gtttttatta-ttttttaaaagatttattgatttactttacgtatacgagtacaccattg 179
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 829 gtttttattatttttttaaaagatttattgatttattttacgtatacgagtacaccattg 770
Query: 180 ctctcttcagacacaccagagaagggcgtccgaccccattacagatggttgtgagccacc 239
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ctctcttcagacacaccataggagggcgtccgaccccattacagatggttgtgagccacc 710
Query: 240 atgtggtcgctgggaattgaactcagagcctctggaagagcagtcagtgctttaaaccgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 709 atgtggtcgctgggaattgaactcagagcctctggaagagcagtcagtgctctaaaccgc 650
Query: 300 tgagccttctttcctgccccaactttctaacagtggtgatttgggggcgtgggagcagg- 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgagccttctttcctgccccaactttctaacagtggtgatttgggggcgtgggagcagga 590
Query: 359 agatgacacgcaggcccagggcctcacacacagtaggctcttctgttttacccttaaatt 418
|| |||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 589 ag-tgacgctcaggcccagggcttcacacacagtaggcacttctgttttacccttaaatt 531
Query: 419 caactccaacccagaagtttgtcatgttggtgagtctagttgacctgctttatttccggt 478
|||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct: 530 caactccaacccagaagtttgtcaggttgttgagtctagttgacctgctttgtttccggt 471
Query: 479 tggttcacatgtggtgtcatatttaagatgtcattgtctccttggttcatcgtcctagag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tggttcacatgtggtgtcatatttaagatgtcattgtctccttggttcatcgtcctagag 411
Query: 539 atttacacccttgcctttatagtccaggctgtt 571
|||||||||||||||||||||||||||||||||
Sbjct: 410 atttacacccttgcctttatagtccaggctgtt 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
