Query= MSMg01no520_h03.b1 MSMg01no520_h03.b1 CHROMAT_FILE:
MSMg01no520_h03.b1 PHD_FILE: MSMg01no520_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:30 2005
(683 letters)
>mm_chr15_83638704_83639785
Length = 1082
Score = 1276 bits (660), Expect = 0.0
Identities = 675/680 (99%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttctactgcctctacttggttactcataacatcttcacctcctatagatag 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttttactgcctctacttggttactcataacatcttcacctcctatagatag 263
Query: 64 taaaatcaatcagcgtgccaccactgtgcccacagataccagcctcgcccctcctgtcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaaatcaatcagcgtgccaccactgtgcccacagataccagcctcgcccctcctgtcac 323
Query: 124 acccctttctgctctgccccctcctgcctcctccttgccactctctcacaggcatcttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acccctttctgctctgccccctcctgcctcctccttgccactctctcacaggcatcttta 383
Query: 184 ctgcccagagattccacttcttggcagttttacagcccatcccgatggtcacccttcgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgcccagagattccacttcttggcagttttacagcccatcccgatggtcacccttcgta 443
Query: 244 cacgttttccagttttcagggtctgtaactcagtaggcactaggtgagcaccttgtctgg 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacattttccagttttcagggtctgtaactcagtaggcactaggtgagcaccttgtctgg 503
Query: 304 gttcgactccagacacgggggattcagctgtgagtctctgtgaagccaagggagagggca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttcgactccagacacgggggattcagctgtgagtctctgtgaagccaagggagagggca 563
Query: 364 gagcatgcacagccagagctgtgagagagcaaggtggtctggagcagagagcatcaggag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagcatgcacagccagagctgtgagagagcaaggtggtctggagcagagagcatcaggag 623
Query: 424 agtctaggacccactgagatgaaggtggagcagagtgggtggcatgggtactgatcctgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtctaggacccactgagatgaaggtggagcagagtgggtggcatgggtactgatcctgt 683
Query: 484 cctggcacattctgggcaggtacaaggactgggagatccactgagtggctgagggaacat 543
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 684 cctggcacattctgggcaggtacaaggactaggagatccactgagtggctgagggaacat 743
Query: 544 tcagggaagccaaggcccagtgagggtgggaatgaagtccaggaagtgaaagcttcaggc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcagggaagccaaggcccagtgagggtgggaatgaagtccaggaagtgaaagcttcaggc 803
Query: 604 aggaggcactttggtgggcttgggcatttgggtagtgtttagactgtgggagggtaggct 663
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 804 aggaggcactttggtgggctcgggcatt-gggtagtgtttagactgtgggagggtaggct 862
Query: 664 cagacaggttgtgggactgc 683
||||||||||||||||||||
Sbjct: 863 cagacaggttgtgggactgc 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_h03.g1 MSMg01no520_h03.g1 CHROMAT_FILE:
MSMg01no520_h03.g1 PHD_FILE: MSMg01no520_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:30 2005
(657 letters)
>mm_chr15_83670539_83671595
Length = 1057
Score = 520 bits (269), Expect = e-151
Identities = 272/273 (99%), Gaps = 1/273 (0%)
Strand = Plus / Minus
Query: 385 caatacaccatccatcactctctcccaccatgagctgccctgagggtagctgaccggtgc 444
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 caata-accatccatcactctctcccaccatgagctgccctgagggtagctgaccggtgc 805
Query: 445 caagaaattgaccgtgttcacctcaaatcttaggacacggttgtggggaagggttcatcc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caagaaattgaccgtgttcacctcaaatcttaggacacggttgtggggaagggttcatcc 745
Query: 505 cacacacctaaccaggtctgggtggagtctgtagctaggctacgaggttctgaagctatg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cacacacctaaccaggtctgggtggagtctgtagctaggctacgaggttctgaagctatg 685
Query: 565 aatacatttttaaaggctggtttataccgtttccatgtgtgtggtttctagcatccttag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatacatttttaaaggctggtttataccgtttccatgtgtgtggtttctagcatccttag 625
Query: 625 gacaccagccactaaggctctcttccttggaag 657
|||||||||||||||||||||||||||||||||
Sbjct: 624 gacaccagccactaaggctctcttccttggaag 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
