Query= MSMg01no521_e07.b1 MSMg01no521_e07.b1 CHROMAT_FILE:
MSMg01no521_e07.b1 PHD_FILE: MSMg01no521_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:33 2005
(578 letters)
>mm_chr15_23776967_23777948
Length = 982
Score = 913 bits (472), Expect = 0.0
Identities = 551/587 (93%), Gaps = 22/587 (3%)
Strand = Plus / Plus
Query: 1 agcagactttgcattttacattgaatacagtctcactangaaaa-tatagaggcaagttc 59
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 201 agcagactttgcattttacattgaatacagtctcacta-gaaaaatatagaggcaagttc 259
Query: 60 atttacatatcanagtaccttcacca-aaccctgacactgttttgctccagcatctgtac 118
|||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 260 atttacatatcaaagtaccttcac-agaaccctgacactgttttgctccagcatctgtac 318
Query: 119 tctactccagataattaagagttatgtccatagtgttagtatgagcaaggagtgctggat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tctactccagataattaagagttatgtccatagtgttagtatgagcaaggagtgctggat 378
Query: 179 tactctgtggtgagaaagaaaactatgagagacaaacttcccagactgcctcttagagta 238
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 tactctgtggtgagaaagaaaactatgagagacaaacttcccagactgccccttagagta 438
Query: 239 gagatcagcaacatggtaagaaaatgagtagattttatatgatagtcaacagggtgagag 298
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 gagatcagcaacatggtaagaaaatgagcagattttatatgatagtcaacagggtgagag 498
Query: 299 tttttgagctgatccaaact----gcttgtattaatcagagtaatctggagctagttgtc 354
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 499 tctttgagctgatccaaacaaacagcttgtattaatcagagtaatctggagctagttgtc 558
Query: 355 cttgcctgagttaattaaccatttgtagtagttaaggaatacagtggttcttttggtagg 414
|||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 559 cttgcctgagttaattaaccatttgtagtagttaaggaatgcagtggttctcttagtagg 618
Query: 415 cagaaatctgagaactttgagaaatttgagatttctgagaactgctgaattgtgtcttgt 474
||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 619 cagaaatctga---c--------atttgagatttctgagaactgctgaattgtgtcttgt 667
Query: 475 g---actcaatagcaatccttctgtttacctggtccgagcctttctgcttaggacattgt 531
| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 668 gtttattcaatagcaatccttctgtttacctggtccgagcctttctgtttaggacattgt 727
Query: 532 cactatcgttgccatttggggggaattttgtacctgatgttctagct 578
||| ||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 728 caccatcattgccacttggggggaactttgtacctgatgttctagct 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 982
Length adjustment: 10
Effective length of query: 568
Effective length of database: 972
Effective search space: 552096
Effective search space used: 552096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_e07.g1 MSMg01no521_e07.g1 CHROMAT_FILE:
MSMg01no521_e07.g1 PHD_FILE: MSMg01no521_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:33 2005
(653 letters)
>mm_chr15_23971204_23972256
Length = 1053
Score = 1210 bits (626), Expect = 0.0
Identities = 647/655 (98%), Gaps = 3/655 (0%)
Strand = Plus / Minus
Query: 1 actctggatactctgtagcanagaatgaaaactgaaagcaaaactaaaacaaata--ttt 58
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 749 actctggatactctatagcagagaatgaaaactgaaagcaaaactaaaacaaatattttt 690
Query: 59 ttttgttgttattgaaattataagtggaagaattcttcaatattgttaatagaaaaatga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttttgttgttattgaaattataagtggaagaattcttcaatattgttaatagaaaaatga 630
Query: 119 ttcattattattaataaaattatatattgttgaaatggtaaaataataatatacacaatg 178
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 629 ttcattattattaataaaattatatattgttgaaatggtaaaataatgatatacacaatg 570
Query: 179 cccaacattggtcatgaagcagttagtgaaattattctgtaaggcacaggagaaatgtga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cccaacattggtcatgaagcagttagtgaaattattctgtaaggcacaggagaaatgtga 510
Query: 239 ggattgtatgaaaacttgagcagagatgatggaaacgaagggagatggctctccagtctc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggattgtatgaaaacttgagcagagatgatggaaacgaagggagatggctctccagtctc 450
Query: 299 cttcttgggaagtgacagaggcaatggacagcacctctagctaggctcacagatcaagct 358
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 449 cttcttgggaagtgacagaggcaatggacagcacctctagccaggctcacagatcaagct 390
Query: 359 actcataagcagcctgtgaaagatggaaaatcaaataggaaatcccaaattaacagaatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actcataagcagcctgtgaaagatggaaaatcaaataggaaatcccaaattaacagaatc 330
Query: 419 agaaatgaatgagaacattgcatcatgatgccaaaaaaaacccatattatactaaagtat 478
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 329 agaaatgaatgagaacattgcatcatgatgcc-aaaaaaacccatattatactaaagtat 271
Query: 479 gtgaaagcacctgtattttattttgttggaagatgtaaaagaaatagacaaatttctaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtgaaagcacctgtattttattttgttggaagatgtaaaagaaatagacaaatttctaga 211
Query: 539 ttcatccatcccactaatgttaaatcagaggaggtcatcaagaatggatgaataaatata 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttcatccatcccactaatgttaaatcagaggaggtcatcaagaatggatgaataaatata 151
Query: 599 ataaataagatgcgaacacccctctgaccaaaatatcccaggtttggatggattc 653
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ataaataagatgcaaacacccctctgaccaaaatatcccaggtttggatggattc 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
