Query= MSMg01no523_o02.b1 MSMg01no523_o02.b1 CHROMAT_FILE:
MSMg01no523_o02.b1 PHD_FILE: MSMg01no523_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:57 2005
(381 letters)
>mm_chr15_6798671_6799451
Length = 781
Score = 576 bits (298), Expect = e-169
Identities = 349/370 (94%), Gaps = 16/370 (4%)
Strand = Plus / Minus
Query: 5 gaattctgtagtgtacgtgctttaagattggtgatctgaacaggagcaaagatgtaagag 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 411 gaattctgtagtgtacgtgctttaagattggtgatctggacaggagcaaagatgtaagag 352
Query: 65 ttgttgcctacgagtgtgacatgtgattactgtgctccacaaactgaggacctatcacgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttgttgcctacgagtgtgacatgtgattactgtgctccacaaactgaggacctatcacgt 292
Query: 125 acaccaaggataagcgtacagactcccactagcttccccgggaaattcaccgtgattggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 291 acaccaaggataagcgtacagactcccactagcttccccgggaaattcaccatgattggc 232
Query: 185 atctccactccccagctgtagaaaatttgccttagttaag-gtcactattgctgcaatca 243
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 231 atctccactccccagctgtagaaaatttgccttagtt-agagtcactattgctgcaatca 173
Query: 244 aacactgggtccaaaagcaacttggggagaaaagggttttgctttttgcctttctggttg 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 172 aacactgggtccaaaagcaacttggggagaaaagggttttgctttttgcctttctgattg 113
Query: 304 ttttgttttgttt---tgttttgt-----tttgtt-ttg-tt-tt-gttttgttttgttt 351
||||||||||||| ||||||| |||||| ||| || || ||||| ||||||||
Sbjct: 112 ttttgttttgtttggttgttttggaggggtttgttgttggttgttagtttttttttgttt 53
Query: 352 tgtt-gtttt 360
||| |||||
Sbjct: 52 -gtttgtttt 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_o02.g1 MSMg01no523_o02.g1 CHROMAT_FILE:
MSMg01no523_o02.g1 PHD_FILE: MSMg01no523_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:57 2005
(663 letters)
>mm_chr15_6667711_6668773
Length = 1063
Score = 1257 bits (650), Expect = 0.0
Identities = 659/662 (99%)
Strand = Plus / Plus
Query: 1 ctgtgtacagttttagttactgctgacgaattaaatttaagctcatgttagctttgaaat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctgtgtacagttttagttactgctgacgaattaaatttaagcttatgttagctttgaaat 260
Query: 61 ggaggttactgtatatacttcctccccctttgtccttttcctttatttaataggagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggttactgtatatacttcctccccctttgtccttttcctttatttaataggagaatt 320
Query: 121 tagagttagctgttaattaggttccagccttgttctttccctgacaaaaggagaaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagttagctgttaattaggttccagccttgttctttccctgacaaaaggagaaaaatt 380
Query: 181 acttgaaaaaaggaaaagcgtttggatttttagaagaaaacaaaaagatgttaagagcct 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttgaaaaaaggaaaagcttttggatttttagaagaaaacaaaaagatgttaagagcct 440
Query: 241 gggtttaaaacagttgattctgttattgtttcttttcctactttcattttttaataattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtttaaaacagttgattctgttattgtttcttttcctactttcattttttaataattc 500
Query: 301 tgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattattttgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattattttgaga 560
Query: 361 taggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaatacatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaatacatat 620
Query: 421 attgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaaggtatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaaggtatgtt 680
Query: 481 ttatgtatggacttaatgtttatttagtttttatagtattggaacttgaatccagggcct 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatgtatgaacttaatgtttatttagtttttatagtattggaacttgaatccagggcct 740
Query: 541 tgttcatagttggcaatcaaccactgaggtacatgcccaatctgtgtttctaaagcatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttcatagttggcaatcaaccactgaggtacatgcccaatctgtgtttctaaagcatgc 800
Query: 601 atatgttaatgacaatagacacatgctcatacatactatcttcacagtttcctaacgtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atatgttaatgacaatagacacatgctcatacatactatcttcacagtttcctaacgtat 860
Query: 661 ac 662
||
Sbjct: 861 ac 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
