Query= MSMg01no524_i10.b1 MSMg01no524_i10.b1 CHROMAT_FILE:
MSMg01no524_i10.b1 PHD_FILE: MSMg01no524_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:50 2005
(560 letters)
>mm_chr15_97832505_97833464
Length = 960
Score = 1035 bits (535), Expect = 0.0
Identities = 554/567 (97%), Gaps = 11/567 (1%)
Strand = Plus / Minus
Query: 5 gaattccacagctttgtatgagagtgggtgggtggggggaggttgtctaaaactttcggt 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 859 gaattccacagctttgtatgagtgtgggtgggtggggggaggttgtctaaaactttcggt 800
Query: 65 ctcttacgattctgcatctgaccatgcc-----------aaaaaaatcgttggttttaca 113
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 799 ctcttacgattctgcatctgaccatgccccccccccccaaaaaaaatcgttggttttaca 740
Query: 114 ccccagcttgcctcaccaatggcagacaccccacactctagccttggatccacaggaccc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccccagcttgcctcaccaatggcagacaccccacactctagccttggatccacaggaccc 680
Query: 174 aaagacctgacgtggggcaaggcgtagcctgtgtggacgttaggaatgtcagaaacctag 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaagacctgacgtggggcaaggcgtagcctgtgtggacgttaggaatgtcagaaacctag 620
Query: 234 agtccaccgcgctcctcctctccatctttccacgagtttgggaaacttgttggccgcgaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agtccaccgcgctcctcctctccatctttccacgagtttgggaaacttgttggccgcgaa 560
Query: 294 gacattgacccacatctgcatttctcagccctagccttccaaaagtgctgctggttcggg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gacattgacccacatctgcatttctcagccctagccttccaaaagtgctgctggttcggg 500
Query: 354 aggggagacctcagtcctcctttgtgagacttgtttgcgttgggggattggcagcgatgg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aggggagacctcagtcctcctttgtgagacttgtttgcgttgggggattggcagcgatgg 440
Query: 414 cttccagatgggctgaaaccctgcccgtatttatttaaactggttcctcgtggagagctg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttccagatgggctgaaaccctgcccgtatttatttaaactggttcctcgtggagagctg 380
Query: 474 tgaatcgggctctgtatgcgctcgagaaaagccccattcatgagaggcaaggcccagtgg 533
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgaatcgggctctgtatgcgcttgagaaaagccccattcatgagaggcaaggcccagtgg 320
Query: 534 gtcccccaactccccgacccccctctc 560
|||||||||||||||||||||||||||
Sbjct: 319 gtcccccaactccccgacccccctctc 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_i10.g1 MSMg01no524_i10.g1 CHROMAT_FILE:
MSMg01no524_i10.g1 PHD_FILE: MSMg01no524_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:50 2005
(576 letters)
>mm_chr15_97655708_97656684
Length = 977
Score = 1100 bits (569), Expect = 0.0
Identities = 575/577 (99%), Gaps = 1/577 (0%)
Strand = Plus / Plus
Query: 1 ccccaccccgactctttccgaacctgtacctcccagcctgccctgctcctcctcgtcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccaccccgactctttccgaacctgtacctcccagcctgccctgctcctcctcgtcatc 260
Query: 61 ccgaaggctgcagaagggaaaccggacctctgggccgagggccaccttaggaaagaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgaaggctgcagaagggaaaccggacctctgggccgagggccaccttaggaaagaggag 320
Query: 121 tgggcttcttggctccagctctgcagggagctaagcggaatgcaagagcgaaagggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggcttcttggctccagctctgcagggagctaagcggaatgcaagagcgaaagggagtt 380
Query: 181 ccttgttcattcccagctcccgaaggaagccgaggactgaccgccagggtttcccatccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttgttcattcccagctcccgaaggaagccgaggactgaccgccagggtttcccatccc 440
Query: 241 agcagggcaacatgaggagaagggaggtggcctggagatagggtggggacactgagtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcagggcaacatgaggagaagggaggtggcctggagatagggtggggacactgagtctg 500
Query: 301 atctgccagctcctctccccgacccctagtaggagcctgcagctggggttgagaaggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctgccagctcctctccccgacccctagtaggagcctgcagctggggttgagaaggctg 560
Query: 361 ggaggcagggggcaaggaataaaggcacttgaagttccagaagagagggcgaaggggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaggcagggggcaaggaataaaggcacttgaagttccagaagagagggcgaaggggaga 620
Query: 421 gaagcagacctcacagacctagtttcttccttcaggctcctccaatcccccgaggctgca 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 gaagcagacctcacagacctagtttcttccttcaggctcctccaatccctcgaggctgca 680
Query: 481 ctgtcttatgccagctgctaatgggaagctctgggtctcccaggggaacccctctactga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtcttatgccagctgctaatgggaagctctgggtctcccaggggaacccctctactga 740
Query: 541 ggagagggaggagacgaggtctgggggccgc-ggccc 576
||||||||||||||||||||||||||||||| |||||
Sbjct: 741 ggagagggaggagacgaggtctgggggccgccggccc 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 977
Length adjustment: 10
Effective length of query: 566
Effective length of database: 967
Effective search space: 547322
Effective search space used: 547322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
