XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
GCCTGGTGTTTATCATCTCTTTCCACACCATTTAGGTCCATCCCTCTTTT
CACTTAAGTCCCTAGAAAAGTTCTCAACGTTACAGGGGAGGAAGACCCTT
TGTATCCTTTTCAAGTAAATGTTGAAAAGTCTCCAACCTTGAATTGTTGA
CTTATTATTTTTATGTTCAGTCTTAACTCCCCTACTAGAGTCGTTAAATT
TTCTCCTAGTAAATAGTGAGTGTTTCCTTGGTGTGCTCACGTGTGTCTAC
TCTGTGCTTTGGTGAGTCGGTCGTTCCTACTTTGTGAAAAGCATTTCTAA
GCACCATGCTTCCAGATTTTGAACTTAGCATGGAAGAAACTTTATATATT
TACACACATATAGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGCTTTTTTCTTTGCGCCCACCCATTGCCCCTATACATTTTTTGATCTA
TTTTTTTCCCCTTTTCATCGCTGATTTTGCCTTTTTTTTCCTGTCCCCCT
TTTTTTTTTTTTCCGCTGCCCCTTTTTCTTTATTTCGCCTTTTCTTTTTT
TTCCCCCCGCCACTTTGTGTTTTTTTATTTTACATGTTTTAAGGGGGGCA
ACCCATTCACTCTTTCTCTTCTCCCTACTCTATGATCTCGCCACCCCCGT
TTTTTTGGTATTAACCCGCAATTCGGCCCTAGGGAGTGTCTTATATATAT
AATAT

TTCCTCCTCCCNNNTNCCCCATTGATAXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTT
ATAAAGTGATTACATATGCTAAATTCAAATTTATCCTAGTGATGTGAAAT
GTTTTTGATTTATTTTTTTAAGGATTTATTTGGTTATTATACATAAAGTA
CACTGTCTTCAGATGCACACAAGGGGGCGCCCTAATCTGATTTAGGGGGG
GGTTGGGAACCCCCCCCGGGGTTGCTCGGAATTGAAACTTAGGGACCTCC
CGAAAACCCACTCCCGGGAAAGAGGGGGCCCTTACCCACCTGGGCCCCCC
TCCCCCCCCTCCCCGTTTTTTTTTCTTCCCCCAATAAAAATTTCCCACCA
ACAGTGGCCCCCCTTTTAAAAAAACCTTCTTTTTGGGAAATTCTTAAAAC
AAAAAAGGTGTTTTTTCTTCTTTGTCGTGGGATAACAAATCCCCTCCCCC
ACATTTCCTTTTTTTACGCACACTCTTTTATTCCACCTCCTTTTTGGGTG
GCTTCCCTCTCCCCTCCTCTAAAAAAAGAAAGTTTCCCCTCCCCCCCTCC
CTTTGTTTTGCTTACCCACCCCCTCCTCTTTTTTGTTTCAAAAAAAAAAT
TTTTTTTTTTTTTCTCTCTCCGGGGTTGCGGGTATTTTTTATAAATAATA
CCCCCTTGTTTTTTTCCCTCAATAACAA

Query= MSMg01no525_m05.b1 MSMg01no525_m05.b1 CHROMAT_FILE:
MSMg01no525_m05.b1 PHD_FILE: MSMg01no525_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:29 2005
         (411 letters)



>mm_chr15_93903362_93904178
          Length = 817

 Score =  760 bits (393), Expect = 0.0
 Identities = 406/413 (98%), Gaps = 6/413 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcctggtgtttatcatctctttccaca-ccatttaggtccatccctcttttca 63
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctgcctggtgtttatcatctctttccacaaccatttaggtccatccctcttttca 264

                                                                       
Query: 64  cttaagtccctagaaaagttctcaacgttacaggggaggaagaccctttgtatccttttc 123
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 cttaagtccctagaaaagttctcaaagttacaggggaggaagaccctttgtatccttttc 324

                                                                       
Query: 124 aagtaaatgttgaaaagtctccaa-----ccttgaattgttgacttattatttttatgtt 178
           ||||||||||||||||||||||||     |||||||||||||||||||||||||||||||
Sbjct: 325 aagtaaatgttgaaaagtctccaattcaaccttgaattgttgacttattatttttatgtt 384

                                                                       
Query: 179 cagtcttaactcccctactagagtcgttaaattttctcctagtaaatagtgagtgtttcc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtcttaactcccctactagagtcgttaaattttctcctagtaaatagtgagtgtttcc 444

                                                                       
Query: 239 ttggtgtgctcacgtgtgtctactctgtgctttggtgagtcggtcgttcctactttgtga 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggtgtgctcacgtgtgtctactctgtgctttggtgagtcggtcgttcctactttgtga 504

                                                                       
Query: 299 aaagcatttctaagcaccatgcttccagattttgaacttagcatggaagaaactttatat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagcatttctaagcaccatgcttccagattttgaacttagcatggaagaaactttatat 564

                                                                
Query: 359 atttacacacatatagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atttacacacatatagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 617


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 817
Length adjustment: 9
Effective length of query: 402
Effective length of database: 808
Effective search space:   324816
Effective search space used:   324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)