NAAACTTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAAC
CAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTA
AAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACAT
AGTACTTGAAATATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGG
GGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGAT
ATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAA
CCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACA
AGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATT
AGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTCGG
CGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGT
CTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCA
TGCTCATGGATTGGCAGGATCAATATTGTAAAAATGGCTATCTTGCCAAA
AGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTAAATTCT
TCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAAATAACAAAAA
CCTAGGA

NNCCCATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTGTCTAACTTTTTCTTATCGAGCT
ATTGATCTTTATCTAATTGAAACGTCAGGTGCTTTGGTGTTTTTTTTTTT
TGTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTTTTAGGGCCCCTCT
TGCTTTGGCCATATTTATTTCATATATGTGGGCACACTGCAGAAGATGGC
ATCAGATGCGCATTACAGATGGTTGTGAGCCACCACGTGGTTGCTGGGAA
TTGAACTCAGGGCCTCTGGAAGAGCAGTCAATGCTCTTAACTGCTGAGCC
ATCTCTCCAGCCCTCTACAAACTTCTAATGCTTCTGCTTATACTGCCCCC
ACCACTTTTCTTTATGCATGTCTTTATCTATTTGACCTTCTTTCCAAACT
TGTCGAGACAGTGCATTCTTTTTAAGAAATGAAGATTTTTTCCCCCACAT
CCCCTGCAGGTCCCAGGCTACCACGAGTTCTCTCTTGACCAACCCATATG
TGTTACACAATGACATGTGACCTTCTGAGGTATGTTGTTTGCTCTGTGTT
TACCTGGTAGCCGTGACCCCTTGAGAGTTTGATACTATGCATGGATCTGT
GGCTCCAACCCAGTAGCACCAAGTTTAGAAATGTGTCTAGATTTTCTTTT
ATCAGAATAAGAATGCGAAAGGAGAACTCCTAAACCTGATAAACAGCT

Query= MSMg01no528_l12.g1 MSMg01no528_l12.g1 CHROMAT_FILE:
MSMg01no528_l12.g1 PHD_FILE: MSMg01no528_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:24 2005
         (633 letters)



>mm_chr15_51931336_51932369
          Length = 1034

 Score = 1151 bits (595), Expect = 0.0
 Identities = 626/637 (98%), Gaps = 5/637 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtctaactttttcttatcgagctattgatctttatctaattgaaacgtcaggtgcttt 60
           |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 199 ttgtctaactttttcttatctagctattgatctttatctaattgaaatgtcaggtgcttt 258

                                                                       
Query: 61  ggtgttttttttttttgttgttgttg--ttgttttttgttttgttttgtttt-ttttagg 117
           |||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||
Sbjct: 259 ggtg-tttttttttttgttgttgttgttttgttttttgttttgttttgttttgttttagg 317

                                                                       
Query: 118 gcccctcttgctttggccatatttatttcatatatgtgggcacactgcagaagatggcat 177
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcctctcttgctttggccatatttatttcatatatgtgggcacactgcagaagatggcat 377

                                                                       
Query: 178 cagatgcgcattacagatggttgtgagccaccacgtggttgctgggaattgaactcaggg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cagatgcgcattacagatggttgtgagccaccacgtggttgctgggaattgaactcaggg 437

                                                                       
Query: 238 cctctggaagagcagtcaatgctcttaactgctgagccatctctccagccctctacaaac 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cctctggaagagcagtcaatgctcttaactgctgagccatctctccagccctctacaaac 497

                                                                       
Query: 298 ttctaatgcttctgcttatactgcccccaccacttttctttatgcatgtctttatctatt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttctaatgcttctgcttatactgcccccaccacttttctttatgcatgtctttatctatt 557

                                                                       
Query: 358 tgaccttctttccaaacttgtcgagacagtgcattctttttaagaaatgaagatttttt- 416
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 558 tgaccttctttccaaacttgtccagacagtgcattctttttaagaaatgaagattttttt 617

                                                                       
Query: 417 cccccacatcccctgcaggtcccaggctaccacgagttctctcttgaccaacccatatgt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cccccacatcccctgcaggtcccaggctaccacgagttctctcttgaccaacccatatgt 677

                                                                       
Query: 477 gttacacaatgacatgtgaccttctgaggtatgttgtttgctctgtgtttacctggtagc 536
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attacacaatgacatgtgaccttctgaggtatgttgtttgctctgtgtttacctggtagc 737

                                                                       
Query: 537 cgtgaccccttgagagtttgatactatgcatggatctgtggctccaacccagtagcacca 596
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 738 cgtgaccccttgagagtttgatactatgcatggatctgtggctccaacccagtaacacca 797

                                                
Query: 597 agtttagaaatgtgtctagattttcttttatcagaat 633
           |||||||||||||||||||||||||||||||||||||
Sbjct: 798 agtttagaaatgtgtctagattttcttttatcagaat 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space:   637952
Effective search space used:   637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)