Query= MSMg01no529_a16.b1 MSMg01no529_a16.b1 CHROMAT_FILE:
MSMg01no529_a16.b1 PHD_FILE: MSMg01no529_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:50 2005
(673 letters)
>mm_chr15_10274670_10275743
Length = 1074
Score = 1257 bits (650), Expect = 0.0
Identities = 665/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 5 gaattc-acaaggagcttgaaaatagaaagacaaattgaaatttcagcagtgaaaatatt 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gaattcaacaaggagcttgaaaatagaaagacaaattgaaatttcagcagtgaaaatatt 815
Query: 64 cataaatcacataaaaactcagttgttgggatcttcaccagggaagtcaactggagaata 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 814 cataaatcacataaaaactcagttgttggaatcttcaccagggaagtcaactggagaata 755
Query: 124 gaacaccagagctgaaagacagacagatataaatgttcagatgataataaggaaaatgaa 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 754 gaacaccagagctgaaagacagaaagatataaatgttcagatgataataaggaaaatgaa 695
Query: 184 ggaagtaaaaatagagactgcacgagttcccagccaccattcaaagtctgaatgtgtggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ggaagtaaaaatagagactgcacgagttcccagccaccattcaaagtctgaatgtgtggg 635
Query: 244 tcatagagagagaagaaggagacgaggggagcaggtgcaaactaaagaagcaggaaacat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tcatagagagagaagaaggagacgaggggagcaggtgcaaactaaagaagcaggaaacat 575
Query: 304 tttaaagaaaatgacagaagagagttcctcaaatcttggataggacatgggcatctaggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tttaaagaaaatgacagaagagagttcctcaaatcttggataggacatgggcatctaggt 515
Query: 364 aggagaggctatgagaatccgggacacgtggatttatatgtaaaactgctctctcctgaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aggagaggctatgagaatccgggacacgtggatttatatgtaaaactgctctctcctgaa 455
Query: 424 gccttccatagtcttttctcagtctctgtctttagtgatttgaccataattcaacacggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gccttccatagtcttttctcagtctctgtctttagtgatttgaccataattcaacacggt 395
Query: 484 tcttctgctcatctttatttctggttctttcacaaccatgagaatataggaaagaccgaa 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 394 tcttctgctcatctttatttctggttctttcacaaccatgagaatataggaaagacggaa 335
Query: 544 tctcattagaagagtaaataatgaagagagaaaggggtcaaatatcacgaaataatcaac 603
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tctcattagaagagtagataatgaagagagaaaggggtcaaatatcacgaaataatcaac 275
Query: 604 aaatggcaggaattagtatgtatcctccagtgataactcggatgttaatggtgtcttgtt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaatggcaggaattagtatgtatcctccagtgataactcggatgttaatggtgtcttgtt 215
Query: 664 tctaattaaa 673
||||||||||
Sbjct: 214 tctaattaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_a16.g1 MSMg01no529_a16.g1 CHROMAT_FILE:
MSMg01no529_a16.g1 PHD_FILE: MSMg01no529_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:50 2005
(689 letters)
>mm_chr15_10119465_10120556
Length = 1092
Score = 1303 bits (674), Expect = 0.0
Identities = 687/692 (99%), Gaps = 3/692 (0%)
Strand = Plus / Plus
Query: 1 attgcatcgccttgctcagcatttgacaggatgtgtctggtgtttcttttagtaacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgcatcgccttgctcagcatttgacaggatgtgtctggtgtttcttttagtaacttct 260
Query: 61 gatttgaccttccagataacttcctagacatcataccagtgttcttacctgtgactttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttgaccttccagataacttcctagacatcataccagtgttcttacctgtgactttta 320
Query: 121 aatttttagttttctcctggcttaaactaatggggcaaaaaaaaaa--tatgcatgaaaa 178
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 aatttttagttttctcctgtcttaaactaatggggcaaaaaaaaaaaatatgcatgaaaa 380
Query: 179 ttgtctttaattcttactctccagcctttgcaaaaatttcaaaaa-ttcatgtgtgagat 237
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ttgtctttaattcttactctccagcctttgcaaaaatttcaaaaaattcatgtgtgagat 440
Query: 238 tatgaatcaaatcctcttttaagccaccccacttccaatatattataactccatgaagcc 297
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tatgaatcaaatcctcttttaagccatcccacttccaatatattataactccatgaagcc 500
Query: 298 aaagcccatggtttacactaactactaccagttctaactcatcaccgtactggaatttcc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagcccatggtttacactaactactaccagttctaactcatcaccgtactggaatttcc 560
Query: 358 cttctaaacataaatatattatttagtgtggttatttgaagatcaactgaagtattttca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttctaaacataaatatattatttagtgtggttatttgaagatcaactgaagtattttca 620
Query: 418 aagaagtacagtggaagtaatgaaacaaaatgggaagcccacctctaccttggtggccat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaagtacagtggaagtaatgaaacaaaatgggaagcccacctctaccttggtggccat 680
Query: 478 gattatcaacagtaggtctacaaaaattccaagaggatttgttgagtcctgagatctaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gattatcaacagtaggtctacaaaaattccaagaggatttgttgagtcctgagatctaaa 740
Query: 538 cctgctaagaatcatattcagagactttaaattattattatttctatttgcttttggttt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctgctaagaatcatattcagagactttaaattattattatttctatttgcttttggttt 800
Query: 598 tgaaactggcatatgaatccattttcagagggctagtggtagatgtccctgtcatggtga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgaaactggcatatgaatccattttcagagggctagtggtagatgtccctgtcatggtga 860
Query: 658 gccttgggccatcacatactttgaaattccat 689
||||||||||||||||||||||||||||||||
Sbjct: 861 gccttgggccatcacatactttgaaattccat 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1092
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1082
Effective search space: 734678
Effective search space used: 734678
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
