Query= MSMg01no533_k20.b1 MSMg01no533_k20.b1 CHROMAT_FILE:
MSMg01no533_k20.b1 PHD_FILE: MSMg01no533_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:56 2005
(654 letters)
>mm_chr15_88809953_88811011
Length = 1059
Score = 1212 bits (627), Expect = 0.0
Identities = 646/655 (98%), Gaps = 5/655 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctgtgttttcttttctttcttt-----ttttttttctcaaggaggctcctgc 59
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctcctgtgttttcttttctttctttcttttttttttttctcaaggaggctcctgc 264
Query: 60 atttttgtaacatttataagaaacaaattttcagaatttaggctttgctgtaaccttaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttttgtaacatttataagaaacaaattttcagaatttaggctttgctgtaaccttaga 324
Query: 120 gcttagaaaccacctctaggctctcaactgactcacaacccaaaaccaagccccaaacac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcttagaaaccacctctaggctctcaactgactcacaacccaaaaccaagccccaaacac 384
Query: 180 ttccacatggcccagcgatcctctcagtactttaatgccatgaacatcagactatagcag 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttccacatggcccagcaatcctctcagtactttaatgccatgaacatcagactatagcag 444
Query: 240 gcaactatacagagcacaaccgttgttccttcttgtgcgggtccctgtattacagcaagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcaactatacagagcacaaccgttgttccttcttgtgcgggtccctgtattacagcaagc 504
Query: 300 ccagcttatgttccaccatcaagtagggctcgcccattagttcactttgtgatggatcat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccagcttatgttccaccatcaagtagggctcgcccattagttcactttgtgatggatcat 564
Query: 360 taagaatatcctcaaaaccaatggtctcatcgctgcccctcaaaatatccagtgagaggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taagaatatcctcaaaaccaatggtctcatcgctgcccctcaaaatatccagtgagaggt 624
Query: 420 ttgagctcgggagaaacaggagaagctccatctgtagcttcaggggagcaaacagaccct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgagctcgggagaaacaggagaagctccatctgtagcttcaggggagcaaacagaccct 684
Query: 480 ggatgctcctcagggtggaaaagttcatcttgtcctggttgagctgcaaattttttctga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggatgctcctcagggtggaaaagttcatcttgtcctggttgagctgcaaattttttctga 744
Query: 540 taattcaagagggtgactgggcaaaagttcatttttcacacaagaaaaccctttccagag 599
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 745 taattcaagagggtgactgggcaaaagttcattttccacacaagaaaaccctttccagag 804
Query: 600 aagatcgtgactctcgaaaggcccgttggctgagagctccgcaactggaatactg 654
|||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 805 aagatcgtgactcttgataggcccgttggctgagagctccgcaactggaatactg 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1059
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1049
Effective search space: 675556
Effective search space used: 675556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_k20.g1 MSMg01no533_k20.g1 CHROMAT_FILE:
MSMg01no533_k20.g1 PHD_FILE: MSMg01no533_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:57 2005
(677 letters)
>mm_chr15_88962887_88963963
Length = 1077
Score = 946 bits (489), Expect = 0.0
Identities = 498/501 (99%)
Strand = Plus / Minus
Query: 177 atttataggcactacctctgggaggtctgccacccttctcaatgacagcctctgctctgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 atttataggcactacctctgggaggtctgccacccttctcaatgacagcctctgctctgt 825
Query: 237 gcctatgtgcacgtctcccattcatgtatacttgtctcccacgtgtggtctctttgtgca 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gcctatgtgcacgtctccccttcatgtatacttgtctcccacgtgtggtctctttgtgca 765
Query: 297 tcccccttttcttggccttcacggatatgaatgccccccttgcatgtggggcactgatgg 356
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 764 tcccccttttcttggccttcacggatatgaatgccacccttgcatgtggggcactgatgg 705
Query: 357 gacttctcagtggacatttggtccgttggctgcatcatggcggagatgattactgggaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gacttctcagtggacatttggtccgttggctgcatcatggcggagatgattactgggaag 645
Query: 417 atcctgttcaaaggcaatgaccgtatccttctatgtagagcacccgttgacttcggccaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 atcctgttcaaaggcaatgaccgtatccttctatgtagagcacccgttgacttcggccaa 585
Query: 477 gatgtgggtgctgggtgggcccccctctgtccctgcattgtattcctgaccttggtacag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gatgtgggtgctgggtgggcccccctctgtccctgcattgtattcctgaccttggtacag 525
Query: 537 acctggaccagctgaaggagatcatgaagatcacagggacgccccctcctgagtttgttc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 acctggaccagctgaaggagatcatgaagatcacagggacgccccctcctgagtttgttc 465
Query: 597 agaagctacagagtgctgaggtcagtgggagtgggtggtgggctggacttgggcttgggg 656
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agaagctacagagtgcagaggtcagtgggagtgggtggtgggctggacttgggcttgggg 405
Query: 657 gctggcctatcaccctttttc 677
|||||||||||||||||||||
Sbjct: 404 gctggcctatcaccctttttc 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
