Query= MSMg01no534_p13.b1 MSMg01no534_p13.b1 CHROMAT_FILE:
MSMg01no534_p13.b1 PHD_FILE: MSMg01no534_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:39 2005
(578 letters)
>mm_chr15_50618739_50619716
Length = 978
Score = 946 bits (489), Expect = 0.0
Identities = 495/497 (99%)
Strand = Plus / Minus
Query: 82 acactttgcaagcaactatttctagattggacaacctcagtttataacaacagaaagttt 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 acactttgcaagcaactatttctagattggacaacctcagtttataacaacagaaagttt 919
Query: 142 atagttaacagagtggtactttacataaattatcttcagcattcatactgttcttaagca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 atagttaacagagtggtactttacataaattatcttcagcattcatactgttcttaagca 859
Query: 202 taagggaccaactattattatctccattctgcagataaggatgttgcattctagagaggc 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 taagggaccaactattattatctccattctgcagataaggatgttgcattctagagaggc 799
Query: 262 ttgatgccttaacaaaagccttgtgcctccttgggaatctacctgtttctgagttaagct 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttgatgccttaacaaaagccttgtgcctccttgggaatctacctgtttctgagttaagct 739
Query: 322 ttacaatatctatgtttccaagcctgaagctatctccttactgattttccccattattac 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttacaatatctatgtttccaagcctgaagctatctccttactgattttccccattattac 679
Query: 382 aaatgtacttatggttagatttcttcagtaatctctccatgtgtaaccatggagacaagg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatgtacttatggttagatttcttcagtaatctctccatgtgtaaccatggagacaagg 619
Query: 442 gtgtttaccacattgccctgctgcaacatagccatgccatgaaaaccattatcccaagca 501
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 618 gtgtttaccacattgccctgctgcaacatagccatgctatgaaaaccattatcccaagca 559
Query: 502 ggtgggttccttatattacatcaacactccagtctatcttaatcttccttataggttaag 561
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 558 ggtgggttccttatattacatcaacactccagtctatcttaatctttcttataggttaag 499
Query: 562 tgggttctctgagaggt 578
|||||||||||||||||
Sbjct: 498 tgggttctctgagaggt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_p13.g1 MSMg01no534_p13.g1 CHROMAT_FILE:
MSMg01no534_p13.g1 PHD_FILE: MSMg01no534_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:39 2005
(356 letters)
>mm_chr15_50440369_50441121
Length = 753
Score = 669 bits (346), Expect = 0.0
Identities = 353/356 (99%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 1 actgaaattgctatcatccagaagatacgatatgactgtaagtcagaagacatggatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaaattgctatcatccagaagatacgatatgactgtaagtcagaagacatggatctg 260
Query: 61 agaaaaagccagcgtacacatttatcaactaaagttctccttagtagagaaggtgtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaaagccagcgtacacatttatcaactaaagttctccttagtagagaaggtgtttta 320
Query: 121 aatgttagggcaatagctttcaagggaattctagtaaaaatacactgaagcaacgaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgttagggcaatagctttcaagggaattctagtaaaaatacactgaagcaacgaaggg 380
Query: 181 gcttgatatgatctgagctcaaatagattgggaattgcaactccagaggaaatgtataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttgatatgatctgagctcaaatagattgggaattgcaactccagaggaaatgtataga 440
Query: 241 ggaatggacccttttttttattgttgttgttgtttgctctttggtgtcagagaatacatg 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaatggacccttttttt-attgttgttgttgtttgctctttggtgtcagagaatacatg 499
Query: 301 ggccaaacaagaaacattttctttagatccatccacacctacatnnctccagcaca 356
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 ggccaaacaagaaacattttctttagatccatccacacctacat--ctccagcaca 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 753
Length adjustment: 9
Effective length of query: 347
Effective length of database: 744
Effective search space: 258168
Effective search space used: 258168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
