Query= MSMg01no535_a02.b1 MSMg01no535_a02.b1 CHROMAT_FILE:
MSMg01no535_a02.b1 PHD_FILE: MSMg01no535_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:42 2005
(702 letters)
>mm_chr15_59514397_59515498
Length = 1102
Score = 1303 bits (674), Expect = 0.0
Identities = 692/698 (99%)
Strand = Plus / Plus
Query: 5 gaattctacaatatgatctttgtttctgtagttgcctgatgagagagagacacattagct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacaatatgacctttgtttctgtagttgcctgatgagagagagacacattagct 264
Query: 65 gtttgctgttctgggctattctgaatgaatgaatcgggtttccatggtgaaagagggtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttgctgttctgggctattctgaatgaatgaatcgggtttccatggtgaaagagggtga 324
Query: 125 agtggatgttgggtgagtaaacacgtttttccaccgtgctctgagttcccgttagaacta 184
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 agtggatgttgggtgagtgaacacgtttgtccaccgtgctctgagttcccgttagaacta 384
Query: 185 tgggcagattcccatccgccacactgagtcctcacttgcctaccccccaccccatgtgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgggcagattcccatccgccacactgagtcctcacttgcctaccccccaccccatgtgat 444
Query: 245 gatggttcctgttgtcaattggacaagatctagaatcaccgtgggtacatctgttcagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatggttcctgttgtcaattggacaagatctagaatcaccgtgggtacatctgttcagga 504
Query: 305 ttgcctagagtaggttaattgagtaagacttgccttaaacgtgggtggcaccatagtgac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgcctagagtaggttaattgagtaagacttgccttaaacgtgggtggcaccatagtgac 564
Query: 365 acacatatatggatctgatgtgatagtggcaatggagggaaacctggcactgaactaaaa 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 acacatatatggatctgatgtgatagcggcaatggagggaaacctggcactgaactaaaa 624
Query: 425 caaacttcttctttttgactggagtttcttttgccagggcattttaacataacagcaaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaacttcttctttttgactggagtttcttttgccagggcattttaacataacagcaaca 684
Query: 485 agagaaactaagttataagcgaaccctaattccatctctctctttgcttcctgactgaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agagaaactaagttataagcgaaccctaattccatctctctctttgcttcctgactgaat 744
Query: 545 gtaaacaggaccagctggtcctaaccctgccgccatgcctctcccacgataatgaactgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 745 gtaaacaggaccagctggtcctaaccctgccgccatgcctctcccacgatattgaactct 804
Query: 605 atctccttgaacactaagttgggataaacctttccgattgtgtcttctctggtgtcttta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atctccttgaacactaagttgggataaacctttccgattgtgtcttctctggtgtcttta 864
Query: 665 ccacagcaaggaagaaagtgaccaataccaacactgcc 702
||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ccacagcaaggaagaaagtgaccaataccaacactgcc 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no535_a02.g1 MSMg01no535_a02.g1 CHROMAT_FILE:
MSMg01no535_a02.g1 PHD_FILE: MSMg01no535_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:42 2005
(640 letters)
>mm_chr15_59652351_59653390
Length = 1040
Score = 1011 bits (523), Expect = 0.0
Identities = 550/559 (98%), Gaps = 2/559 (0%)
Strand = Plus / Minus
Query: 83 atgatttacaggatcccagccacatacctacac-gcatacacatgcctatgcatatacat 141
|||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 1040 atgattcacaggatcccagccacatacctac-ctgcatacacatgcttatgcatatacat 982
Query: 142 ctatacaacatccccaaccatggttatgatgggtatgccccacctgagttaacgtaagat 201
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 981 ctatacaacatccccaaccatggttatgatggatatgccccacctgagttaacgtaagat 922
Query: 202 actccctcacgggcacgaccagactccatgacccaggtgagtctagacgctgtcaagtta 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 actccctcacgggcacgaccagactccatgacccaggtgagtctagacgctgtcaagtta 862
Query: 262 acaatcagcactaaccatcacctcaaatcaatggccctccactggaggtcaactcaggtg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 acaatcagcactaaccatcacctcaaatcaatggccctccactggaggtcaactcaggtg 802
Query: 322 cccatcactttcctgttgaatctgccttcttattggtgttgcctgggccacacatacctt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cccatcactttcctgttgaatctgccttcttattggtgttgcctgggccacacatacctt 742
Query: 382 ggatctacctctctctctccattaccctctgctcctggaggctctcagcatctcagcacc 441
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggatctacctctctctttccattaccctctgctcctggaggctctcagcatctcagcacc 682
Query: 442 gatcaagtcagtgcatagccaccaagaattcacaagccctgcactatgaagagcccccct 501
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 gatcaagtcagtgcatagccaccaagaattcacaagccctgcactatgaagagccccctt 622
Query: 502 gcccttcttgggatgcatgcatgagcatacgccctccttctagcagcctgagaatcttct 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 gcccttcttgggatgcatgcatgagcatacgccctccttctagcagcctgagaatattct 562
Query: 562 acaattttactgggtcagcagtgttcctctccttgtgcccactttaaaggtgaaggagct 621
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaattttactggatcagcagtgttcctctccttgtgcccactttaaaggtgaaggagct 502
Query: 622 gagacagacactgataaac 640
|||||||||||||||||||
Sbjct: 501 gagacagacactgataaac 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
