Query= MSMg01no536_b05.b1 MSMg01no536_b05.b1 CHROMAT_FILE:
MSMg01no536_b05.b1 PHD_FILE: MSMg01no536_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:05 2005
(663 letters)
>mm_chr15_27441002_27442063
Length = 1062
Score = 1102 bits (570), Expect = 0.0
Identities = 631/660 (95%), Gaps = 18/660 (2%)
Strand = Plus / Plus
Query: 5 gaattcttatgttttgacttaatttggtcagagggaaatgttacacttcttcagaagctc 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 220 gaattcttatgttttgacttaatttggtcagatggaaatgttacacttcttcagaagctc 279
Query: 65 acatcatcttaattcacatcatggtgcgtggcttgtatgcagtgggtcacccgctggtgt 124
||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aca----------tcac-----ggtgcgtggcttgtatgcagtgggtcacccgctggtgt 324
Query: 125 tctgtgctgagttgcagtggttggttagaggtgaggtttaatgcatggttact-agcttt 183
||||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||
Sbjct: 325 tctgtgctgagttgcagtggttggttagaggtgaggtttaatgcacggctactca-cttt 383
Query: 184 ctaaagtcactgcccctgtctgtggaaagcggctccctggtaggcatacccttcccgtag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 ctaaagtcactgcccctgtctgtggaaagcggctccctggtaggcatacccttcccatag 443
Query: 244 caaaggtgacacaagactgccctggaaccccacagagtcattttcattgtggaaaagctc 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 caaaggtgacacaagactgccctggaaccccacagagtcattttcaatgtggaaaagctc 503
Query: 304 tccttggatcgttgctgggtctcactgggacagctcacttcttcagaagggttttcctgt 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccttggatcgttgctgggcctcactgggacagctcacttcttcagaagggttttcctgt 563
Query: 364 cctggtgatagcagtgtggtcccaagcaggcatggatgcatggtaagtgtaccaggcgat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctggtgatagcagtgtggtcccaagcaggcatggatgcatggtaagtgtaccaggcgat 623
Query: 424 ttcctgtccagttgtctttgcttactgtgcagttgccttacaggtcacacagacggggct 483
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcctgcccagttgtctttgcttactgtgcagttgccttacaggtcacacagacggggct 683
Query: 484 ggagtgcagcataatgtgtgatttcagtatttccactttgtgaaggtgattataggaact 543
||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 684 ggagtacagcatactgtgtgatttcagtgtttccactttgtgaaggtgattataggaact 743
Query: 544 ccccagagtctcctcccaagacggccacagcttctggatcttgagacagactcctggtga 603
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 744 ccccagagtctcctcccaagacggccacagcttctggatcttgagagagactcctggtga 803
Query: 604 cctgcctccttctccagaatctctgctggaacgtgaggcttgagtgtctcctgggggaag 663
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 804 cctgcctccttctccagaatctctgctggaac-tgaggcttgagtgtctcctgggggaag 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1062
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1052
Effective search space: 686956
Effective search space used: 686956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_b05.g1 MSMg01no536_b05.g1 CHROMAT_FILE:
MSMg01no536_b05.g1 PHD_FILE: MSMg01no536_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:05 2005
(555 letters)
>mm_chr15_27608049_27609003
Length = 955
Score = 953 bits (493), Expect = 0.0
Identities = 499/501 (99%), Gaps = 1/501 (0%)
Strand = Plus / Minus
Query: 1 agaaggtgagcatgcctgcgcccagggagagaggcgaactggaacagttagtatcagccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaggtgagcatgcctgcgcccagggagagaggcgaactggaacagttagtatcagccg 442
Query: 61 agaaaggagtgatgcccacagtgtgtgtgaactttacgtccacagggactacgggggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaggagtgatgcccacagtgtgtgtgaactttacgtccacagggactacgggggatg 382
Query: 121 ggcgtttatactggagctcctctggccttggggagctgcttggtaagcagggggctcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcgtttatactggagctcctctggccttggggagctgcttggtaagcagggggctcagg 322
Query: 181 cagttagtaactgtcctgaggggtgcaagtagctgttcccaagtcctgctctaaggaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttagtaactgtcctgaggggtgcaagtagctgttcccaagtcctgctctaaggaaga 262
Query: 241 gagaaatattttccttctttgaaaaaaaaagatggtttaaggatttgcagctacattata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaatattttccttctttgaaaaaaaaagatggtttaaggatttgcagctacattata 202
Query: 301 cacatacagacacacaggcagacacacagatatacagacagactcacacacatgttttta 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatacagactcacaggcagacacacagatatacagacagactcacacacatgttttta 142
Query: 361 aaccaaagatctatagttgatatgttttgctatttgtttgctccacttttagacttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aaccaaagatctatagttgatatgttttgctatttgtttgctccacttttagacttctct 82
Query: 421 tatttctatggaatgactagccaatggcatgtaa-ttttttttttaaagcggatgtgtta 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 81 tatttctatggaatgactagccaatggcatgtaatttttttttttaaagcggatgtgtta 22
Query: 480 tctaggtagagattctttact 500
|||||||||||||||||||||
Sbjct: 21 tctaggtagagattctttact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
