Query= MSMg01no537_a07.b1 MSMg01no537_a07.b1 CHROMAT_FILE:
MSMg01no537_a07.b1 PHD_FILE: MSMg01no537_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:17 2005
(586 letters)
>mm_chr15_91043083_91044069
Length = 987
Score = 1042 bits (539), Expect = 0.0
Identities = 572/583 (98%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 5 gaattccacagagctttctctccttgccctccctccctcctgcaactcattgcgtcatct 64
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattccacagagctacctctccttgccctccctccgtcctgcaactcattgcgtcatct 264
Query: 65 cagacccccactccagcaggtaccatcggctcctactcccagggaagcaggcaggttgac 124
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagacctccactccagcaggtaccatcggctcctactcccagggaagcaggcaggttgat 324
Query: 125 tggaggccttcacctttccctctgccttttcagatccactgcccctgcttatttttcctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggaggccttcacctttccctctgccttttcagatccactgcccctgcttatttttcctg 384
Query: 185 accagattacccaaagattccttggtacaagtgatgaactttgctttct-aatacaatat 243
||||||||||||||||||||||||||||||||||||||||| ||||| | || | |||||
Sbjct: 385 accagattacccaaagattccttggtacaagtgatgaacttcgctttataaaaagaatat 444
Query: 244 tagaatttgagaattagaatctttgagaatttcatacactatactattattatgatcatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagaatttgagaattagaatctttgagaatttcatacactatactattattatgatcatg 504
Query: 304 ttcacctcaattttgtcctctccatgtttcccatgtccctttacagtcttccaacttgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttcacctcaattttgtcctctccatgtttcccatgtccctttacagtcttccaacttgaa 564
Query: 364 aatatcctgtttattttaccactaaagtataaaatttctggtaatttgcagtgaaagcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatatcctgtttattttaccactaaagtataaaatttctggtaatttgcagtgaaagcaa 624
Query: 424 gatatgactcttactagttgtatgagtaccaatatatcacagtaccccacttggactatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatatgactcttactagttgtatgagtaccaatatatcacagtaccccacttggactatt 684
Query: 484 tataatttttaatgtaaagactgtgttttctatgaataatacaaatttaattctgagctc 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tataatttttaatgtaaagattgtgttttctatgaataatacaaatttaattctgagctc 744
Query: 544 atgctatttgccaactagtttactactttttttctttttttct 586
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgctatttgccaactagtttactactttttttctttttttct 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space: 562752
Effective search space used: 562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_a07.g1 MSMg01no537_a07.g1 CHROMAT_FILE:
MSMg01no537_a07.g1 PHD_FILE: MSMg01no537_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:17 2005
(659 letters)
>mm_chr15_91203895_91204954
Length = 1060
Score = 1230 bits (636), Expect = 0.0
Identities = 654/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 1 aggtctgccctgagcttcagttccttcttacagacaggaaatcagccctgcagctgacag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 860 aggtctgccctgagcttcagttccttcttacagacaggaaatcagccctgaagctgatgg 801
Query: 61 tttgctttgaggaatgggagtgtgacccaagcagaagctaagtggggtagtctcaggcaa 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tctgctttgaggaatgggagtgtgacccaagcagaagctaagtggggtagtctcaggcaa 741
Query: 121 aacacatatcagctccttatgggcaagaataagaaactctccagcattgggga-tttttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 740 aacacatatcagctccttatgggcaagaataagaaactctccagcattggggattttttt 681
Query: 180 tttcttgccacaaatttgttcagttaccatgatggtagttgtagattttagggtgtgtta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttcttgccacaaatttgttcagttaccatgatggtagttgtagattttagggtgtgtta 621
Query: 240 tgtaaacgattttgtatacaaatggctgcttcatttcactttgagaactatgagtttctg 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtaaatgattttgtatacaaatggctgcttcatttcactttgagaactatgagtttctg 561
Query: 300 tttgtgcaacatacaatgtaacctaaaggaagctattattaattaaaacgaggatattaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttgtgcaacatacaatgtaacctaaaggaagctattattaattaaaacgaggatattaa 501
Query: 360 ataaaaggttcaacatggagctcaccatgagtgagagtggactggattgccctggggagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataaaaggttcaacatggagctcaccatgagtgagagtggactggattgccctggggagt 441
Query: 420 agcttgctatgattattttaatatataggcctgctaccgtgcaaatacctgctagagttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcttgctatgattattttaatatataggcctgctaccgtgcaaatacctgctagagttt 381
Query: 480 gaaaaagaagtcttgtttctgttggctaaaggatagtcatgattgtttcctgagatttct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaaaagaagtcttgtttctgttggctaaaggatagtcatgattgtttcctgagatttct 321
Query: 540 ttatgttcggtatgtcttagaatattaatatccataggcttctctgaagaatagtatcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttatgttcggtatgtcttagaatattaatatccataggcttctctgaagaatagtatcat 261
Query: 600 accgtagaatcagcagcttttgtgggactaacgatattgaaaatgcactcacatgcatcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 accgtagaatcagcagcttttgtgggactaacgatattgaaaatgcactcacatgcatcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
