Query= MSMg01no537_a12.b1 MSMg01no537_a12.b1 CHROMAT_FILE:
MSMg01no537_a12.b1 PHD_FILE: MSMg01no537_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:18 2005
(568 letters)
>mm_chr15_73930523_73931490
Length = 968
Score = 978 bits (506), Expect = 0.0
Identities = 552/572 (96%), Gaps = 8/572 (1%)
Strand = Plus / Minus
Query: 5 gaattcttcaaagccttgcccatccaatggtcccagaggatcctgttttctccccactta 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 583 gaattcttcaaagccctgtccatccaatggtcccagaggatcctgttttctccccacata 524
Query: 65 gaaaagacctgagcgctgttgcagctcatataaatgagtgcagagataaatggctttttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaaaagacctgagcgctgttgcagctcatataaatgagtgcagagataaatggctttttc 464
Query: 125 ctgccccatcgttctcctagaacaggcggctcaggtctgttcccactgaccactcaccca 184
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 463 ctgccccatcgttctccaagaacaggcagctcaggtctgttcccactgaccactcaccca 404
Query: 185 cttggctacctggagtaactactaaggctgacatttacggagtcacaggctacatattca 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 403 cttggctacctggagtaactactaaggctgatatttacggagtcacaggctacatattca 344
Query: 245 tcatgggaaattgcattattaggaacccacctggatctcaccacagccgtatgtgggagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcatgggaaattgcattattaggaacccacctggatctcaccacagccgtatgtgggagg 284
Query: 305 aactcttggcagccaggaccctggtggggagacaaagaatggggaagttcaggagacacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aactcttggcagccaggaccctggtggggagacaaagaatggggaagttcaggagacacc 224
Query: 365 acaagactgggcagc--------tggagccagggcagacgcctatgtgatgcttaatctt 416
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 223 acaagactgggcagctggatcagtggagccagggcagacgcctatgtgatgcttaatctt 164
Query: 417 aattgtcagttcgcctggactttaattcaccatggaaactcactcctggatatctcttta 476
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 163 aactgacagttcgcctggactttaattcaccatggaaactcactcctggatatctctctc 104
Query: 477 tgagggtattttcagaacaatttaactgaagaaggaagaccatttggaatgtgggtggca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tgagggtattttcagaacaatttaactgaagaaggaagaccatttggaatgtgggtggca 44
Query: 537 ccatcccctgggctggggtcctagactgcata 568
|||||||||||||||||||||| | |||||||
Sbjct: 43 ccatcccctgggctggggtcctggtctgcata 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_a12.g1 MSMg01no537_a12.g1 CHROMAT_FILE:
MSMg01no537_a12.g1 PHD_FILE: MSMg01no537_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:18 2005
(533 letters)
>mm_chr15_73749220_73750152
Length = 933
Score = 1031 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Plus
Query: 1 cttcaagctctgaggctagcccttatcctggaggatgttgagtcccccttcctccaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcaagctctgaggctagcccttatcctggaggatgttgagtcccccttcctccaatgg 260
Query: 61 accaacccaggcagctctttctctccaaagcagacaaaggggatgagggagaaagactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaacccaggcagctctttctctccaaagcagacaaaggggatgagggagaaagactaa 320
Query: 121 gaggtgagaatccaggaggctagtttggagggcttccctgttcagtctagggccttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggtgagaatccaggaggctagtttggagggcttccctgttcagtctagggccttgctg 380
Query: 181 aagtctgagccaggccactctcctggggaagtttgctggccttacgctgtcccctccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtctgagccaggccactctcctggggaagtttgctggccttacgctgtcccctccatc 440
Query: 241 tgtgcgatttgcacgatgtaggccaccttactggaccctgatgaccttagtggctgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcgatttgcacgatgtaggccaccttactggaccctgatgaccttagtggctgaaat 500
Query: 301 gggcctcccctgagtgctcacacccacactggggcaagcctcctccagagctccagtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcctcccctgagtgctcacacccacactggggcaagcctcctccagagctccagtcct 560
Query: 361 tggtggttatgggggtggttggagctgtgcccccatttactgcgctgactcatgagctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggtggttatgggggtggttggagctgtgcccccatttactgcgctgactcatgagctgt 620
Query: 421 tgacaggtgagtcatggggaaggagggtggcagggcttctaggcttgcagcctgttaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgacaggtgagtcatggggaaggagggtggcagggcttctaggcttgcagcctgttaact 680
Query: 481 gacagcctagctcactggagaggaggcaggcctgccagttacctatgccgtgt 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacagcctagctcactggagaggaggcaggcctgccagttacctatgccgtgt 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
