Query= MSMg01no537_m09.b1 MSMg01no537_m09.b1 CHROMAT_FILE:
MSMg01no537_m09.b1 PHD_FILE: MSMg01no537_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:14 2005
(276 letters)
>mm_chr15_64990387_64991061
Length = 675
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctctattttgctataatagccacatagatgatatttaatacaatatttatttt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggaattcctctattttgatataatagccacatagatgatatttaatacaatatttatttt 270
Query: 64 gtaaacagacagaaattttcatccttaatttgaacaatataatcataacattgagaaata 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtaaacaga-agaaattttcatccttaatttgaacaatataatcataacattgagaaata 211
Query: 124 gtattacattattaatcattaatattttaataaattaagagtgttattttaaccaattta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtattacattattaatcattaatattttaataaattaagagtgttattttaaccaattta 151
Query: 184 agattaaaaattatgtagaatattatgaaaataagtatttcagaaattt 232
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agattaaaaattatgtagaatattatgaaaataagtatttcagaaattt 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 675
Length adjustment: 9
Effective length of query: 267
Effective length of database: 666
Effective search space: 177822
Effective search space used: 177822
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no537_m09.g1 MSMg01no537_m09.g1 CHROMAT_FILE:
MSMg01no537_m09.g1 PHD_FILE: MSMg01no537_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:14 2005
(456 letters)
>mm_chr15_64831415_64832271
Length = 857
Score = 814 bits (421), Expect = 0.0
Identities = 447/457 (97%), Gaps = 5/457 (1%)
Strand = Plus / Plus
Query: 1 tcagaagtgactatagtgtgcttattttcaaaaatagttcctttgcacctagctctttaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaagtgactatagtgtacttattttcaaaaatagttcctttgcacctagctctttaa 260
Query: 61 tgctattttttt-gaatttcttttattagatccaattcaatgttgcctgagttacttgtc 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctattttttttgaatttcttttattagatccaattcaatgttgcctgagttacttgtc 320
Query: 120 tctgctattgaatgcttccatgaggcccctgctggtaatgcatggttagaaggaaagaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgctattgaatgcttccatgaggcccctgctggtaatgcatggttagaaggaaagaat 380
Query: 180 ggagtacttaggttctggtgggttagaaggaaactttgaagaaatgttgtaaacagccct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagtacttaggttctggtgggttagaaggaaactttgaagaaatgttgtaaacagccct 440
Query: 240 tctctctcttctacctgctttggggacccctgccctcctactgggttgtcttgttcagcc 299
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 441 tctctctcttctacctgctttggagacccctgccctcctactgggtcgtcttgttcagcc 500
Query: 300 ttaatattaggggaggtgcctaatcttattgcaacttgatataccatgtttgcatgatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaatattaggggaggtgcctaatcttattgcaacttgatataccatgtttgcatgatat 560
Query: 360 ccctgggcatatcaaaaggcatgatggcctgccgtcttctgaaggtaaatggtggagaag 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 ccctgggcatatcaaaaggcatgatggcctgccgtcttctgaaggtaaatgg---agaag 617
Query: 420 tagatgagtaggggagtggtgggatgaagtatagttg 456
||||||||||||||| ||||||||| | |||||||||
Sbjct: 618 tagatgagtaggggaatggtgggatta-gtatagttg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 857
Length adjustment: 10
Effective length of query: 446
Effective length of database: 847
Effective search space: 377762
Effective search space used: 377762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
