Query= MSMg01no539_c19.b1 MSMg01no539_c19.b1 CHROMAT_FILE:
MSMg01no539_c19.b1 PHD_FILE: MSMg01no539_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:01 2005
(632 letters)
>mm_chr15_84034513_84035544
Length = 1032
Score = 1178 bits (609), Expect = 0.0
Identities = 626/632 (99%)
Strand = Plus / Plus
Query: 1 cctgcctgtgctgtggagccgtgctctgatttccctgagccccttcctcccatccccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgcctgtgctgtggagccgtgctctgatttccctgagccccttcctcccatccccgag 260
Query: 61 ccgagctccccgaattgcacaccttatccactgcttccctgtgagtttggactcaagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgagctccccgaattgcacaccttatccactgcttccctgtgagtttggactcaagagt 320
Query: 121 ggtgcttggagcaccttgatcttcacagttacacccctccacccgcctgcgcgcacaggc 180
|||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 321 ggtgctcggagcaccttgatcttcacagttacacccctccacccgcctgtgcacacaggc 380
Query: 181 tctgtcagagaggtggggctcttccttcacaggcacgagttgtgttcttcttcttcctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtcagagaggtggggctcttccttcacaggcacgagttgtgttcttcttcttcctcc 440
Query: 241 tgctgctgtaacgtccttttgttacctgtccatgtggcttcctgctccaggcttttagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgctgtaacgtccttttgttacctgtccatgtggcttcctgctccaggcttttagga 500
Query: 301 attcggcacaggcatgtctccagccaccttctcttctcttccagcctggggggttgaggg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcggcacaggcatgtctccagccaccttctcttctcttccagcctggggggttgaggg 560
Query: 361 gtggagggctccactgtacttattctgttcttccgtttacctaccatttccacctaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggagggctccactgtacttattctgttcttccgtttacctaccatttccacctaccca 620
Query: 421 cgcacctgtctacacatccttcttccatctacccattctcttacccacccatttgtgtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgcacctgtctacacatccttcttccatctacccattctcttacccacccatttgtgtgc 680
Query: 481 tccccacctgctccctggatgccagacactctaggtgcttatatcaagaggtgggagtaa 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccccacctgctccctggctgccagacactctaggtgcttatatcaagaggtgggagtaa 740
Query: 541 ggaggtcatcgtagtttgggtttcattgctgtgatgagacactgtgacatagcaaccctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaggtcatcgtagtttgggtttcattgctgtgatgagacactgtgacatagcaaccctt 800
Query: 601 ataacgaanacattaatttggggctggcttac 632
|||||||| |||||||||||||||||||||||
Sbjct: 801 ataacgaaaacattaatttggggctggcttac 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_c19.g1 MSMg01no539_c19.g1 CHROMAT_FILE:
MSMg01no539_c19.g1 PHD_FILE: MSMg01no539_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:02 2005
(668 letters)
>mm_chr15_84184917_84185984
Length = 1068
Score = 1224 bits (633), Expect = 0.0
Identities = 660/669 (98%), Gaps = 2/669 (0%)
Strand = Plus / Minus
Query: 1 tgtctgacccagatatccgggttcctttttctatgcttcttaccagtggcctccaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tgtctgacccagatatccgggttcctttttctatgcttcttaccagtggcctccaggggc 809
Query: 61 cccaggaaacctcaaagggggctctcatcttctctactcctaacttatttcctgctacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 cccaggaaacctcaaagggggctctcatcttctctactcctaacttatttcctgctacaa 749
Query: 121 gctcagtggtcgctgctcagcaagaattaaaagactgtaaaaatggctgtgaaatttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gctcagtggtcgctgctcagcaagaattaaaagactgtaaaaatggctgtgaaatttcag 689
Query: 181 taaaggaacagctagaacttctagaaacatccagactgtgacagaaactaagtgagtgac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 688 taaaggaacagctagaacttctagaaacatccagactgtgacagaaactaagtgagtggc 629
Query: 241 agagccacggtggtctccgtttgatcagggtgcacgggtttagcacactagctgctggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agagccacggtggtctccgtttgatcagggtgcacgggtttagcacactagctgctggag 569
Query: 301 taagccccagatggggagtctgggtattg-ttgacccaggtagagttggaggcaggtgct 359
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 568 taagccccagatggggagtctgggtattgctt-acccaggtagagttggaggcaggtgct 510
Query: 360 tctgaccatcaagccctgctcgctggtgcttccatctggaggcttgaggatgctgttgct 419
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 509 tctgaccatcaagccctgctcgctggtgcttccatctggaggcttgaggaaactgttgct 450
Query: 420 tggtcttctcctgagcattggagaaccgaggcatccatcagaacctggctttattcatct 479
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 449 tggtcttctcctgagcactggagaaccgaggcatccatcagaacctgactttattcatct 390
Query: 480 ccattgagtaggacttcagtgggctacctcaggttgcaaagaagtctgggtaatatagtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccattgagtaggacttcagtgggctacctcaggttgcaaagaagtctgggtaatatagtt 330
Query: 540 cagcacaagcccagcatgaggaatgaaggggcatccaggttgtctagggcatggctgctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cagcacaagcccagcatgaggaatgaaggggcatccaggttgtctagggcatggctgctg 270
Query: 600 atggaaggggaggatgtagctgaagctagcagtctagcacatagctctctatccatcact 659
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 269 atggaaggggaggatgtagcagaagctagctgtctagcacatagctctctatccatcact 210
Query: 660 tcagctccc 668
|||||||||
Sbjct: 209 tcagctccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
