Query= MSMg01no543_m14.b1 MSMg01no543_m14.b1 CHROMAT_FILE:
MSMg01no543_m14.b1 PHD_FILE: MSMg01no543_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:15 2005
(687 letters)
>mm_chr15_70279980_70281066
Length = 1087
Score = 978 bits (506), Expect = 0.0
Identities = 512/514 (99%)
Strand = Plus / Minus
Query: 5 gaattctcatcatatgaaggcagcactttgcaggaggaatcacttcctgggaaggcgaag 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattctcatcaaatgaaggcagcactttgcaggaggaatcacttcctgggaaggcgaag 455
Query: 65 ggcttggagggctcgccattggaactggattctagcatagcacagcacaaagccctcagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggcttggagggctcgccattggaactggattctagcatagcacagcacaaagccctcagc 395
Query: 125 taaggtgactgcattctgtcctggaagccagaaactagtggtgttggtgggagaggagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 taaggtgactgcattctgtcctggaagccagaaactagtggtgttggtgggagaggagga 335
Query: 185 ccccgcagaagcaggagcccctgcaagagggcgcccgaatctggtgatgcatagatgggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccccgcagaagcaggagcccctgcaagagggcgcccgaatctggtgatgcatagatgggg 275
Query: 245 agccgcagctctgactggggtgccatggacagtgtggtgagcctgagggtctgcagttgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agccgcagctctgactggggtgccatggacagtgtggtgagcctgagggtctgcagttgg 215
Query: 305 tgcacaggactgtactggctaattttgtgtcaacttgacacagctggagttatcacagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tgcacaggactgtactggctaattttgtgtcaacttgacacagctggagttatcacagag 155
Query: 365 aaaggagcttcagttgaagaaatgcctccatgagaaacaactgtaaggcattttctcaat 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 154 aaaggagcttcagttgaagaaatgcctccatgagatacaactgtaaggcattttctcaat 95
Query: 425 tagtgatcaagggggaaaggccccttgtgggtgggaccctctttgggctggtagtcttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tagtgatcaagggggaaaggccccttgtgggtgggaccctctttgggctggtagtcttgg 35
Query: 485 ttctataagagagcaggctgagcaagccagggga 518
||||||||||||||||||||||||||||||||||
Sbjct: 34 ttctataagagagcaggctgagcaagccagggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_m14.g1 MSMg01no543_m14.g1 CHROMAT_FILE:
MSMg01no543_m14.g1 PHD_FILE: MSMg01no543_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:15 2005
(653 letters)
>mm_chr15_70122766_70123817
Length = 1052
Score = 1201 bits (621), Expect = 0.0
Identities = 645/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Plus
Query: 1 aattccaagcactgtcaaaaatagtttcagaaaacaaatacataactaagttaattttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccaagcactgtcaaaaatagtttcagaaaacaaatacataactaagttaattttaa 260
Query: 61 taacctatgtttcaattattcatatgcataaatataaggagactgataactaaaataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacctatgtttcaattattcatatgcataaatataaggagactgataactaaaataaaa 320
Query: 121 atcaggtttgtggggaagtgatggaatgaatctaagtatgatcaaagcaaattgcatgtt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 atcaggtttgtggggaagtgatggaatgaatcta-gtatgatcaaagcaaattgcatgtt 379
Query: 181 tacctaaggaatcctcagaatcaatactgccatgaaaaaaatgaactatgttagttgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacctaaggaatcctcagaatcaatactgccatgaaaaaaatgaactatgttagttgaac 439
Query: 241 ttggacattttattttttaattcagtgtcttaggctgatctttaactcatgtctgttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttggacattttattttttaattcagtgtcttaggctgatctttaactcatgtctgttctc 499
Query: 301 tcttctcctgtatcactactgtgaatgctagagttatagccatgcatgactactaattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcttctcctgtatcactactgtgaatgctagagttatagccatgcatgactactaattaa 559
Query: 361 cttcaagttggggtttctaatgtatgtttcaagtactatgatttctttgtttatattttt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attcaagttggggtttctaatgtatgtttcaagtactatgatttctttgtttatattttt 619
Query: 421 tatatcagcatttctttgcccttggcacaaactgtgcagtcagagtgaaccgaggtagga 480
||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| || |
Sbjct: 620 tatatcaccatttctttgcccttggcacaaactgtgcagacagagtgaacagaggaagaa 679
Query: 481 ttgtgctttcagttagtcagtcaataagcataaagagaacagatgtatcattacatccct 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgggctttcagttagtcagtcaataagcataaagagaacagatgtatcattacatccct 739
Query: 541 gatcagcaggaagaaacacactgcttattaagcatctatctttaccctgtactaacattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatcagcaggaagaaacacactgcttattaagcatctatctttaccctgtactaacattt 799
Query: 601 gtcattgtcttaacatgggtctctgggttcactatcatagcaacatgtgaatt 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtcattgtcttaacatgggtctctgggttcactatcatagcaacatgtgaatt 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1052
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1042
Effective search space: 670006
Effective search space used: 670006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
