Query= MSMg01no546_f19.b1 MSMg01no546_f19.b1 CHROMAT_FILE:
MSMg01no546_f19.b1 PHD_FILE: MSMg01no546_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:38 2005
(693 letters)
>mm_chr15_52126181_52127273
Length = 1093
Score = 1332 bits (689), Expect = 0.0
Identities = 689/689 (100%)
Strand = Plus / Plus
Query: 5 gaattctctccagaggaaatgcagaggaagatggcagtaccggttccttgatggtgggct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctccagaggaaatgcagaggaagatggcagtaccggttccttgatggtgggct 264
Query: 65 tatccttccctgctctgcctcacaatctcctccacctttatagatctttggtctatattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatccttccctgctctgcctcacaatctcctccacctttatagatctttggtctatattc 324
Query: 125 aaatgactattgtttttccaggttccttttcatctgtggaaaggaaggtagcttgcaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatgactattgtttttccaggttccttttcatctgtggaaaggaaggtagcttgcaatg 384
Query: 185 aagtgatgtgtcaatccttggaattttgtgacttgaaattcttttgtgagcaacccagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtgatgtgtcaatccttggaattttgtgacttgaaattcttttgtgagcaacccagaa 444
Query: 245 gaccccattccgtattaactgggattgatattcttgatggtgttatctgggctaggtcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaccccattccgtattaactgggattgatattcttgatggtgttatctgggctaggtcat 504
Query: 305 ccacattctgctgaaggccgtccagccaaggtagatgaagttcactcagagggtagttat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccacattctgctgaaggccgtccagccaaggtagatgaagttcactcagagggtagttat 564
Query: 365 ttacctagcaaagagtttgccaagggctttaaaagatgccatatctagaatatgcttaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttacctagcaaagagtttgccaagggctttaaaagatgccatatctagaatatgcttaga 624
Query: 425 tcatagatttcagtgagtgataacctttgttccccactttaggaatgaaatccccaaata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcatagatttcagtgagtgataacctttgttccccactttaggaatgaaatccccaaata 684
Query: 485 gtcctagaagaggggtcattaaaatcctcacagctgcttagaggtcatctctgaactata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtcctagaagaggggtcattaaaatcctcacagctgcttagaggtcatctctgaactata 744
Query: 545 tcccaggagaaatgcttgtagaaacaaaatggaacaggaaaacaaaatgaggctagtgta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcccaggagaaatgcttgtagaaacaaaatggaacaggaaaacaaaatgaggctagtgta 804
Query: 605 gaggaagacagagggtggctatttgcagctcactcaggtgtgctctgaaggtaaatgtct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaggaagacagagggtggctatttgcagctcactcaggtgtgctctgaaggtaaatgtct 864
Query: 665 tacatcagcattatcagagcaactccact 693
|||||||||||||||||||||||||||||
Sbjct: 865 tacatcagcattatcagagcaactccact 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_f19.g1 MSMg01no546_f19.g1 CHROMAT_FILE:
MSMg01no546_f19.g1 PHD_FILE: MSMg01no546_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:38 2005
(662 letters)
>mm_chr15_52278653_52279714
Length = 1062
Score = 493 bits (255), Expect = e-143
Identities = 298/333 (89%), Gaps = 32/333 (9%)
Strand = Plus / Minus
Query: 1 ataagtgcaccaatgatgccctgattcatacttctagcttaggttactttcaagaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ataagtgcaccaatgatgccctgattcatacttctagcttaggttactttcaagaacaga 274
Query: 61 ttcaaattctgctcaatgctccatatctctaccataggaattgtaccttttatatttatc 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 273 ttcaaattctgctcaacgctccatatctctaccataggaattgtaccttttacatttatc 214
Query: 121 tgcttgagaaggttctctctctctctctctctctctctctctctctct------------ 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgcttgagaaggttctctctctctctctctctctctctctctctctctctctctctctct 154
Query: 169 --------------------ttctccactttacatcccaattgagccctcccctccctac 208
||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctctctctctctctccctctttctccactttacatcccaattgagccctcccctccctac 94
Query: 209 tctcctcccagtcctatccttacaaatatcttcatcattacctgtgaattgctgtctata 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tctcctcccagtcctatccttacaaatatcttcatcattacctgtgaattgctgtctata 34
Query: 269 tgcaggtgagggaaggcacaagataaggttaga 301
|||||||||||| ||||||||||||||||||||
Sbjct: 33 tgcaggtgagggcaggcacaagataaggttaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
