BAC Information

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BAC

Clone NameB6Ng01-005E06
Chromosome16 (Build37)
Map Location 59,763,695 - 59,764,617
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneOlfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005E06.bB6Ng01-005E06.g
ACCDH842449DH842450
length9121,018
definitionDH842449|Mus musculus domesticus DNA, BAC clone: B6Ng01-005E06, 5' end.DH842450|Mus musculus domesticus DNA, BAC clone: B6Ng01-005E06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttacatgaaatgactgctataataaaacaagtttgcatgttt
ccccccactcttttctttcttgtcagaagaattaaatgcacttctcatat
tgaatgtcaccaataaagtacagtattattcctattacagatctttcctt
gatcaactgaaatttgatattctctggccaacatgtcccatttcttctct
acgtctctgatatggactaattgcagttctatatatatgtgagataagtt
gtatattttttctgtgtctgaattatttcactctgcataatgtcttttag
ctcttcagggtgttttatattgctgcaaatggtagatcccccttttaaaa
gttcagataacattcttcatggttagcatcagggttagaagtactggatg
tttagggttgaaccctgacaacatattcatttaatatataccaaaataat
taaataaatatataaaattctgtgatctatatctatgtatatacattata
gattttgtgcagagtgaaattttatacacacacacacacacacacacaca
cacacatgaatatatgtgtgtgagtgtatgagagatagagaaagagagag
agagagagagagagagagagagagtgatgtcagggcccaacgttagttat
gcacactgatcttatcgtacttatatagttaggaatataaagtgttatta
ctatgtaatatacatagcaatactatgcatatttaataatgaataaaagc
catgattttatgagggagcaatgggattcactcataagtgttagaggaga
aaaggaaagaaaagggaggaaatgatgtattgagtttaatttcaaaaagt
atgaaaagagaggtggctgtctttcccttaaatgacattctgtgattttg
catccatctggc
gaattctctggtggagtttttggttctcacttaaatatatgatcatatca
tgtgcaaagagtgatattttgacttcttcctttctaagttgtatcccttt
gacttattttgttttctaattgttctatctagaacttcaggtactatact
gaatagatagggagagagagggcagccttgtctagtccctgattttagtg
agattgcttcaagtttctctccgtttagtttgatgctggctactggtttt
ttgtagcttttcctatgtttaactatgggccttgaattcctgatctttcc
aacacttttaacataaaaggatgttggattttgttaaatgctttttcatc
ctctaatgaaatgatcacgtgttgttctttttcccattgaatttgtttat
gtaatggattatattaatggatttccgtatattgaaacatccctgtatct
ctgggatgaaggctacttgatcgtagtgaatgatcgttttgatgtgttct
tgaattcaattagcaagaattttattgagtatttctgcatcaatattcat
aagggaaaatggtctgaagttctcgttctttgttgggtctttgtgtggtt
ttggcatcagcttaattgtggcttcataaaatgaattgggaagtgttcct
tctgtttccattttgtagaatagtttaaagagtattagtattgggtcttc
tttgagggtcttgtacaattctgcactaaaaccgtctggtcctgggctct
ttttgggtgggagacttttaatgactgcttctattttctttgggggactg
tttagatcatttatctgatcctgatttaactttagtacctggtatcttta
gatccgtttggtttcataagttctgttagtttcactgtgtcagtttagtg
tgtgttttcctgatctgtccattgatgagagaggggtgttgagtcctcca
cattattgtgtgagtgcatatgtgcttttttctttataaattctttatga
ttggaagtgccctttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59763695_59764617
seq2: B6Ng01-005E06.b_48_959

seq1  GAATTCATTTACATGAAATGACTGCTATAATAAAACAAGTTTGCATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACATGAAATGACTGCTATAATAAAACAAGTTTGCATGTTT  50

seq1  CCCCCCACTCTTTTCTTTCTTGTCAGAAGAATTAAATGCACTTCTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACTCTTTTCTTTCTTGTCAGAAGAATTAAATGCACTTCTCATAT  100

seq1  TGAATGTCACCAATAAAGTACAGTATTATTCCTATTACAGATCTTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTCACCAATAAAGTACAGTATTATTCCTATTACAGATCTTTCCTT  150

seq1  GATCAACTGAAATTTGATATTCTCTGGCCAACATGTCCCATTTCTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACTGAAATTTGATATTCTCTGGCCAACATGTCCCATTTCTTCTCT  200

seq1  ACGTCTCTGATATGGACTAATTGCAGTTCTATATATATGTGAGATAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTCTGATATGGACTAATTGCAGTTCTATATATATGTGAGATAAGTT  250

seq1  GTATATTTTTTCTGTGTCTGAATTATTTCACTCTGCATAATGTCTTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTTTTCTGTGTCTGAATTATTTCACTCTGCATAATGTCTTTTAG  300

seq1  CTCTTCAGGGTGTTTTATATTGCTGCAAATGGTAGATCCCCCTTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGGGTGTTTTATATTGCTGCAAATGGTAGATCCCCCTTTTAAAA  350

seq1  GTTCAGATAACATTCTTCATGGTTAGCATCAGGGTTAGAAGTACTGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATAACATTCTTCATGGTTAGCATCAGGGTTAGAAGTACTGGATG  400

seq1  TTTAGGGTTGAACCCTGACAACATATTCATTTAATATATACCAAAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGTTGAACCCTGACAACATATTCATTTAATATATACCAAAATAAT  450

seq1  TAAATAAATATATAAAATTCTGTGATCTATATCTATGTATATACATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATATATAAAATTCTGTGATCTATATCTATGTATATACATTATA  500

seq1  GATTTTGTGCAGAGTGAAATTTTATACACACACACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTGCAGAGTGAAATTTTATACACACACACACACACACACACACA  550

seq1  CACACATGAATATATGTGTGTGAGTGTATGAGAGATAGAGAAAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  CACACATGAATATATGTGTGTGAGTGTATGAGAGATAGAGAA--AGAGAG  598

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGTGATGTCAGGGCCCAACGTTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGTGATGTCAGGGCCCAACGTTAGTT  648

seq1  ATGCACACTGATCTTATCGTACTTATATAGTTAGGAATATAAAGTGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACTGATCTTATCGTACTTATATAGTTAGGAATATAAAGTGTTAT  698

seq1  TACTATGTAATATACATAGCAATACTATGCATATTTAATAATGAATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTAATATACATAGCAATACTATGCATATTTAATAATGAATAAAA  748

seq1  GCCATGATTTTATGAGGGAGCAATGGGATTCACTCATAAGTGTTAGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCCATGATTTTATGAGGGAGCAATGGGATTCACTCATAAGTGTTAGAGG-  797

seq1  AGAAAAGGAAAGAAAAGGGAGGAAATGATGTAATTGAGTTTTAATTTCAA  850
      ||||||||||||||||||||||||||||||| |||||| ||||||||| |
seq2  AGAAAAGGAAAGAAAAGGGAGGAAATGATGT-ATTGAG-TTTAATTTC-A  844

seq1  AAAAGTATTGAAAAGAAGAGGTGGCTGCCTTTCCCTTAAAATGTACATTC  900
      ||||||| ||||||| ||||||||||| ||||||||| ||||| ||||||
seq2  AAAAGTA-TGAAAAG-AGAGGTGGCTGTCTTTCCCTT-AAATG-ACATTC  890

seq1  TGTGATTTTGCATTCCATCTGTC  923
      |||||||||||| |||||||| |
seq2  TGTGATTTTGCA-TCCATCTGGC  912