BAC Information

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BAC

Clone NameB6Ng01-005M06
Chromosome16 (Build37)
Map Location 32,299,184 - 32,347,509
singlet/doubletdoublet
Overlap geneRnf168, LOC666966, Ubxd7
Upstream geneApod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik
Downstream geneTm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005M06.bB6Ng01-005M06.g
ACCDH842814DH842815
length1,115761
definitionDH842814|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M06, 5' end.DH842815|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,346,380 - 32,347,509)(32,299,184 - 32,299,946)
sequence
gaattcaaggccagcctggtctacaaagcaagtgcaggacaatcaggact
ctgctacatagagaaaccctgtctcaaaataccaaaaccaaaaaaacaac
aacaaaaaaattgtcaaattaaaagaagtcaccaggtctagaaaggagcc
cagcaattaagaacagagggcctgagttctcagcatccttaagtcagctc
ccaactatctgtgcaattccagttccaggaatcagataccttctgattct
gaaagcacaaggcaaacacgcagagcacacacacaaacatacatgcaagg
aggcaaaacactcatgtacataaaataaatctatcataaaaagtttgtaa
ggaggaggaagtttaattcgtggaaaagtttaaaccctggcagcaaacaa
aaaagaaactaaagtgcctggggataaagaggtataaaagttagaatcag
gctgggtagtggtggcacatgcctttaactccagcactctggagacagag
gcgggaggatctctgtagattctggtctattctaattgtggctcaatctt
tgatcccagagctttttgtttactgtaaacaaggaattgtggtgtggctc
aatcttttatttatacaccaattcagccaagtttcaagacagacatggct
atacagagaaacccaaaacaaaacaaagttacaacctctaaaaactgcat
gtctagtttctatacccaataataatgggaaaacattctacatattcctt
tctgtacataggcaaaggaatgtataacacacaaaaagggctgggaaact
cctcagataaacttggtttctaaatcataatcatattcttcactggttgt
atgattaggaaacttactaatttctctagctttagttctcctagttataa
gatggaaatgctaccaactttcatgagtgctattgtgaatttctaaaatg
cattatgaggggctggagagatgactcatggttaaagcactttgctcttg
tagagacttgggttcagttctctgctccacatgtggcttatgacatctac
tctagttctaggggttctatgcctctctttgactccaagcatagcctgca
tgtatgcccagtaat
gaattccaaagataggaactccctacagcaaactaatgcagatcactcaa
aatctccgaggaacacaaaaggtgactattgggagccctttaaaaacaca
tggaaggattcagttaatggaacaaagatgccaacttctactcaagataa
ttgtaatgtatctaaaagtgcctataccgtacagcatagaaagtcccaga
gaagcattgttcaaatgtttcagagataaccaagcaaagcatggggaaag
agttctataatccagaaatgatgtattgcaaagctagctcttctgtccta
atatcctgagatgtctcacattctgctcagcaagcttgcttactctctga
ggtttggttacaaaggaagaatttacaaatgtgtttctacaaaagacggc
tagtaggaaacaaccttgggaattgtttccattgtcaataactgcagtgt
tctaagtgtggcatctttacaggtataaaaacaccttggtcagtacatct
tcaggtgccacttccctttccaaaacttttatagccttttttttccctct
ttttttttttaaatgaatgggtaaggagtccacacaggtatcttccataa
cactaattagttcccttcatagttttaattctaagcattttagcatttcc
tttgaattaaaataggtaagtatcggactggagagatggctctcggttta
gagcgcagactgctcttctgagggtcgctgctcttctgaaggtcgcaagt
tccaatcccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32346380_32347509
seq2: B6Ng01-005M06.b_44_1158 (reverse)

seq1  ATTACTGTGCATTACATGCAAGCTTGGTGCCTGTGGAGGTCAGAAGAGAG  50
      ||||||| ||| |||||||| |||   |||   |||| |||| |||||||
seq2  ATTACTGGGCA-TACATGCAGGCT--ATGC--TTGGA-GTCA-AAGAGAG  43

seq1  CATTAGAACCCCCTAGAACTAGAGTTAGGATGGTCATAAGCCACATGTGG  100
         ||||| ||||||||||||||||   ||| |||||||||||||||| |
seq2  GCATAGAA-CCCCTAGAACTAGAGT--AGAT-GTCATAAGCCACATGT-G  88

seq1  GAGCAGAGAACTGAACCCAGGTCTTCTACAAGAGC-AAGTGCTTTTAACC  149
      ||||||||||||||||||| ||| ||||||||||| |||||| |||||||
seq2  GAGCAGAGAACTGAACCCAAGTC-TCTACAAGAGCAAAGTGC-TTTAACC  136

seq1  ATGAGTCATCTCTCCAGCCCCTCATAATGCATTTTTTAGAAATTCACAAT  199
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  ATGAGTCATCTCTCCAGCCCCTCATAATGCA--TTTTAGAAATTCACAAT  184

seq1  AGCACTTCATG-AAGTTGGTAGCATTTCCATCTTATAACTAGGAGAACTA  248
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGCAC-TCATGAAAGTTGGTAGCATTTCCATCTTATAACTAGGAGAACTA  233

seq1  AAGCTTAGAGAAATTAGTAAGTTTCCTAATCATACAACCAGTGAAGAATA  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGC-TAGAGAAATTAGTAAGTTTCCTAATCATACAACCAGTGAAGAATA  282

seq1  TGATTATGATTTAG-AACCAAGTTTATCTGAGGAGTTTCCCAGCCCTTTT  347
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGATTATGATTTAGAAACCAAGTTTATCTGAGGAGTTTCCCAGCCCTTTT  332

seq1  TGTGTGTTATACATTCCTTTGCCTATGTACAGAAAGGAATATGTAGAATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTATACATTCCTTTGCCTATGTACAGAAAGGAATATGTAGAATG  382

seq1  TTTTCCCATTATTATTGGGTATAGAAACTAGACATGCAGTTTTTAGAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATTATTATTGGGTATAGAAACTAGACATGCAGTTTTTAGAGGT  432

seq1  TGTAACTTTGTTTTGTTTTGGGTTTCTCTGTATAGCCATGTCTGTCTTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTTGTTTTGTTTTGGGTTTCTCTGTATAGCCATGTCTGTCTTGA  482

seq1  AACTTGGCTGAATTGGTGTATAAATAAAAGATTGAGCCACACCACAATTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGCTGAATTGGTGTATAAATAAAAGATTGAGCCACACCACAATTC  532

seq1  CTTGTTTACAGTAAACAAAAAGCTCTGGGATCAAAGATTGAGCCACAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTACAGTAAACAAAAAGCTCTGGGATCAAAGATTGAGCCACAATT  582

seq1  AGAATAGACCAGAATCTACAGAGATCCTCCCGCCTCTGTCTCCAGAGTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGACCAGAATCTACAGAGATCCTCCCGCCTCTGTCTCCAGAGTGC  632

seq1  TGGAGTTAAAGGCATGTGCCACCACTACCCAGCCTGATTCTAACTTTTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTAAAGGCATGTGCCACCACTACCCAGCCTGATTCTAACTTTTAT  682

seq1  ACCTCTTTATCCCCAGGCACTTTAGTTTCTTTTTTGTTTGCTGCCAGGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTTATCCCCAGGCACTTTAGTTTCTTTTTTGTTTGCTGCCAGGGT  732

seq1  TTAAACTTTTCCACGAATTAAACTTCCTCCTCCTTACAAACTTTTTATGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTTTCCACGAATTAAACTTCCTCCTCCTTACAAACTTTTTATGA  782

seq1  TAGATTTATTTTATGTACATGAGTGTTTTGCCTCCTTGCATGTATGTTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATTTTATGTACATGAGTGTTTTGCCTCCTTGCATGTATGTTTG  832

seq1  TGTGTGTGCTCTGCGTGTTTGCCTTGTGCTTTCAGAATCAGAAGGTATCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCTCTGCGTGTTTGCCTTGTGCTTTCAGAATCAGAAGGTATCT  882

seq1  GATTCCTGGAACTGGAATTGCACAGATAGTTGGGAGCTGACTTAAGGATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTGGAACTGGAATTGCACAGATAGTTGGGAGCTGACTTAAGGATG  932

seq1  CTGAGAACTCAGGCCCTCTGTTCTTAATTGCTGGGCTCCTTTCTAGACCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACTCAGGCCCTCTGTTCTTAATTGCTGGGCTCCTTTCTAGACCT  982

seq1  GGTGACTTCTTTTAATTTGACAATTTTTTTGTTGTTGTTTTTTTGGTTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTTCTTTTAATTTGACAATTTTTTTGTTGTTGTTTTTTTGGTTTT  1032

seq1  GGTATTTTGAGACAGGGTTTCTCTATGTAGCAGAGTCCTGATTGTCCTGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTGAGACAGGGTTTCTCTATGTAGCAGAGTCCTGATTGTCCTGC  1082

seq1  ACTTGCTTTGTAGACCAGGCTGGCCTTGAATTC  1130
      |||||||||||||||||||||||||||||||||
seq2  ACTTGCTTTGTAGACCAGGCTGGCCTTGAATTC  1115

seq1: chr16_32299184_32299946
seq2: B6Ng01-005M06.g_69_829

seq1  GAATTCCAAAGATAGGAACTCCCTACAGCAAACTAATGCAGATCACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGATAGGAACTCCCTACAGCAAACTAATGCAGATCACTCAA  50

seq1  AATCTCCGAGGAACACAAAAGGTGACTATTGGGAGCCCTTTAAAAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCGAGGAACACAAAAGGTGACTATTGGGAGCCCTTTAAAAACACA  100

seq1  TGGAAGGATTCAGTTAATGGAACAAAGATGCCAACTTCTACTCAAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATTCAGTTAATGGAACAAAGATGCCAACTTCTACTCAAGATAA  150

seq1  TTGTAATGTATCTAAAAGTGCCTATACCGTACAGCATAGAAAGTCCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGTATCTAAAAGTGCCTATACCGTACAGCATAGAAAGTCCCAGA  200

seq1  GAAGCATTGTTCAAATGTTTCAGAGATAACCAAGCAAAGCATGGGGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATTGTTCAAATGTTTCAGAGATAACCAAGCAAAGCATGGGGAAAG  250

seq1  AGTTCTATAATCCAGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATAATCCAGAAATGATGTATTGCAAAGCTAGCTCTTCTGTCCTA  300

seq1  ATATCCTGAGATGTCTCACATTCTGCTCAGCAAGCTTGCTTACTCTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGAGATGTCTCACATTCTGCTCAGCAAGCTTGCTTACTCTCTGA  350

seq1  GGTTTGGTTACAAAGGAAGAATTTACAAATGTGTTTCTACAAAAGACGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTACAAAGGAAGAATTTACAAATGTGTTTCTACAAAAGACGGC  400

seq1  TAGTAGGAAACAACCTTGGGAATTGTTTCCATTGTCAATAACTGCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAAACAACCTTGGGAATTGTTTCCATTGTCAATAACTGCAGTGT  450

seq1  TCTAAGTGTGGCATCTTTACAGGTATAAAAACACCTTGGTCAGTACATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGTGGCATCTTTACAGGTATAAAAACACCTTGGTCAGTACATCT  500

seq1  TCAGGTGCCACTTCCCTTTCCAAAACTTTTATAGCCTTTTTTTTCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGCCACTTCCCTTTCCAAAACTTTTATAGCCTTTTTTTTCCCTCT  550

seq1  TTTTTTTTTTAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAAATGAATGGGTAAGGAGTCCACACAGGTATCTTCCATAA  600

seq1  CACTAATTAGTTCCCTTCATAGTTTTAATTCTAAGCATTTTAGCATTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTAGTTCCCTTCATAGTTTTAATTCTAAGCATTTTAGCATTTCC  650

seq1  TTTGAATTAAAATAGGTAAGTATCGGACTGGAGAGATGGCTCAGCGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||  ||||| 
seq2  TTTGAATTAAAATAGGTAAGTATCGGACTGGAGAGATGGCTC-TCGGTTT  699

seq1  AGAGCGCAGACTGCTCTTCTGAAGGTCAGCTGCTCTTCTGAAGGTCGCAA  750
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  AGAGCGCAGACTGCTCTTCTGAGGGTC-GCTGCTCTTCTGAAGGTCGCAA  748

seq1  GTTCAAATCCCAG  763
      |||| ||||||||
seq2  GTTCCAATCCCAG  761