BAC Information

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BAC

Clone NameB6Ng01-011K21
Chromosome16 (Build37)
Map Location 83,135,957 - 83,137,022
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011K21.bB6Ng01-011K21.g
ACCDH846996DH846997
length1,049984
definitionDH846996|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K21, 5' end.DH846997|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaggtcaacaagttgaagtgcgcaagtgaggatgtttaggt
gtcttaaacattacaccactaatcaatacccacgttgtagcatgtctttg
atgtcctttgacaataatgtctgattatatagaatatatttcatttatca
atttctcattacatgatcacttaaattatttctgctttttgtgtattaag
tacagtaatgttttaaccttttaagaggaagcaaaatcaatagagcacat
gtcttatacttaattagtgttgtaacatgaagtttttatttaaaaagcaa
ataaaaggtgtaaaatacacaactttaccaaattacattatagataatta
tttctgtttctaggaaaaggacaaatccccctgactatctcagaagagaa
tgttgtcagccctgtagttgtatcaattgaatatttatcctctttggtct
agcttaaatgggggctatcagatgacaatacagatgttgtcgtaactata
tttatttattttgtctaagtttctttgttctttttttttttttttggttg
ttttttgctttgttttgttttgttttgagatgtggttccaatatatactt
tgaaactcattatgcagacaagctcacagaaatctgcctgtctctgtgta
ttaaagtctgtagtgcttcatgcagctgtttctctattcttttcttgatt
cttttataattttagacttgtgttggtcttagtatatactgcatgctcaa
taaatcttagatggatcaaaaacttatataagaaaaatgcttttgtgaat
aatgtattatggtcaggagaaataattttaattcaatgatatcctattct
tcgtgatttttactggttaggcacaaggaatggaatgaaatactagttca
tttaaaatttccacttgttacttatttgcacttcaaaatttgtaagaaaa
aatgtatctagaaatattatatgacatattttatagattagttactctga
gttatatgtttggtattttcatatgaataaatgtactgtaccctgggtt
gaattctgtctgtagttcctgagaaaattggacatagtgctacctgaggg
cccagctatacttgaggacaagctgagtgcctgagcatatacccagaaga
tgttccaacatataataaggacacatgctccaccatgttcatagcatgca
tatttataatagccagaagctggaaacaacccagatgtccctcaacagag
gaatggataaagaaaatgtggtacatttacacaagggagtactactcagc
tattaaaaacaaagaatttatgaaactcttaggcaaatggatggaacttg
aaactatcatcttgaatgatgtaattcagtcacaaaagaatacagtggta
tatactcactgataagtggatattagaccaaaagttcagaacacccaaaa
ttaattcttagaccatatgaaatccaagagggatgatcaaatgtgtatgt
gttcctgctttttagaatggtgaacaaaatactcacaggaggaatatgga
gacaaagtgtggaatagagaatgaaagaaacgtcattccgagattacccc
acctggggatatatcccatatacagacaccaaccatggtcgctattgtag
atgactagaagtacttgctgatggaatcctaatatagctgtctcctcaga
ggctctaccagagcctgacaaacacagagttagatgcttgcagccaacca
ttggactgagaatggggtccctgatggaggagttggagaagggagtgacg
gagctgagggagtttgcagccccatggagggagcaacagtgtcaacaggc
taagagctccagggtactgtgccaccaaccaaagaataccagtgactcag
ccgcatatgtggcagaggatgacattgttgggacatcagtgggatgagag
gctctttgggttctgagttgttcatgccccagtgtaggattcaagggaga
aaaaaacaaaagttgggtgggtgagtggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83135957_83137022
seq2: B6Ng01-011K21.b_46_1094 (reverse)

seq1  AACCCAGGGTTACAGTACATTTTATTGTCATATGAAAAATACCAAACATT  50
      ||||||||| ||||||||| |||||  ||||||| ||||||||||||| |
seq2  AACCCAGGG-TACAGTACA-TTTAT--TCATATG-AAAATACCAAACA-T  44

seq1  ATAAACTCAGAGTAAACTAAATCTATAAAATATTGTCATTATAATAATTT  100
      || |||||||||| |||| ||||||||||||| ||||| |||||||  ||
seq2  AT-AACTCAGAGT-AACT-AATCTATAAAATA-TGTCA-TATAATA--TT  87

seq1  TCTAAGATACATTTTTTTCCTTACAAATTTTGGAAGTGCAAATAAGTAAC  150
      ||| |||||||||||||  |||||||||||| ||||||||||||||||||
seq2  TCT-AGATACATTTTTT--CTTACAAATTTT-GAAGTGCAAATAAGTAAC  133

seq1  AAGTGGAAATTTTAAATGAACTAGTATTTCATTCCATTCCTTGTGCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAATTTTAAATGAACTAGTATTTCATTCCATTCCTTGTGCCTAA  183

seq1  CCAGTAAAAATCACGAAGAATAGGATATCATTGAATTAAAATTATTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAAAATCACGAAGAATAGGATATCATTGAATTAAAATTATTTCTC  233

seq1  CTGACCATAATACATTATTCACAAAAGCATTTTTCTTATATAAGTTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATAATACATTATTCACAAAAGCATTTTTCTTATATAAGTTTTTG  283

seq1  ATCCATCTAAGATTTATTGAGCATGCAGTATATACTAAGACCAACACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCTAAGATTTATTGAGCATGCAGTATATACTAAGACCAACACAAG  333

seq1  TCTAAAATTATAAAAGAATCAAGAAAAGAATAGAGAAACAGCTGCATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATTATAAAAGAATCAAGAAAAGAATAGAGAAACAGCTGCATGAA  383

seq1  GCACTACAGACTTTAATACACAGAGACAGGCAGATTTCTGTGAGCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTACAGACTTTAATACACAGAGACAGGCAGATTTCTGTGAGCTTGTC  433

seq1  TGCATAATGAGTTTCAAAGTATATATTGGAACCACATCTCAAAACAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATGAGTTTCAAAGTATATATTGGAACCACATCTCAAAACAAAAC  483

seq1  AAAACAAAGCAAAAAACAACCAAAAAAAAAAAAAAAGAACAAAGAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGCAAAAAACAACCAAAAAAAAAAAAAAAGAACAAAGAAACTT  533

seq1  AGACAAAATAAATAAATATAGTTACGACAACATCTGTATTGTCATCTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATAAATAAATATAGTTACGACAACATCTGTATTGTCATCTGAT  583

seq1  AGCCCCCATTTAAGCTAGACCAAAGAGGATAAATATTCAATTGATACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCATTTAAGCTAGACCAAAGAGGATAAATATTCAATTGATACAAC  633

seq1  TACAGGGCTGACAACATTCTCTTCTGAGATAGTCAGGGGGATTTGTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGCTGACAACATTCTCTTCTGAGATAGTCAGGGGGATTTGTCCTT  683

seq1  TTCCTAGAAACAGAAATAATTATCTATAATGTAATTTGGTAAAGTTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAAACAGAAATAATTATCTATAATGTAATTTGGTAAAGTTGTGT  733

seq1  ATTTTACACCTTTTATTTGCTTTTTAAATAAAAACTTCATGTTACAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACACCTTTTATTTGCTTTTTAAATAAAAACTTCATGTTACAACAC  783

seq1  TAATTAAGTATAAGACATGTGCTCTATTGATTTTGCTTCCTCTTAAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGTATAAGACATGTGCTCTATTGATTTTGCTTCCTCTTAAAAGG  833

seq1  TTAAAACATTACTGTACTTAATACACAAAAAGCAGAAATAATTTAAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATTACTGTACTTAATACACAAAAAGCAGAAATAATTTAAGTGA  883

seq1  TCATGTAATGAGAAATTGATAAATGAAATATATTCTATATAATCAGACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAATGAGAAATTGATAAATGAAATATATTCTATATAATCAGACAT  933

seq1  TATTGTCAAAGGACATCAAAGACATGCTACAACGTGGGTATTGATTAGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCAAAGGACATCAAAGACATGCTACAACGTGGGTATTGATTAGTG  983

seq1  GTGTAATGTTTAAGACACCTAAACATCCTCACTTGCGCACTTCAACTTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGTTTAAGACACCTAAACATCCTCACTTGCGCACTTCAACTTGT  1033

seq1  TGACCTTTTTGAATTC  1066
      ||||||||||||||||
seq2  TGACCTTTTTGAATTC  1049