BAC Information

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BAC

Clone NameB6Ng01-013E14
Chromosome16 (Build37)
Map Location 43,516,135 - 43,659,265
singlet/doubletdoublet
Overlap geneZbtb20, LOC100043314
Upstream geneBC002163, LOC667484
Downstream geneDrd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1, Ccdc52, Wdr52, Boc, LOC100043731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013E14.bB6Ng01-013E14.g
ACCDH848145DH848146
length1,104944
definitionDH848145|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E14, 5' end.DH848146|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,658,163 - 43,659,265)(43,516,135 - 43,517,089)
sequence
gaattcacctactatgagtttggtgcatcatagaggttgtgtactgggtg
ctggggctcttgtagttcctttagtcttcagaactcattggctgcactgg
gcctccccatactactgtaggttgagaacttagcatcctaaatttgagga
gtagaagacacatggcaaaaatgagacatttattgccttgagtttaagag
gccattggctgaaagagttgggggaggaggctggattttaagtttctaac
tgggcactgactgcatgattttaagctccttactcaacttttcaaggtct
ccattgttttgtatgtaagaagtgaggttacagttctgtcctatatcaca
aagttgtgatacatggctgtcaagctttctcaggaattcttgctgtcttg
taactactgtctgtgatgagctaaaatattctcaattctttttggtctgg
tttcctcggccctttaagcccagctcatccagttcaattcgctataaaaa
cattttagagaattcagcctgtgatgcgcacactgttttctactttactg
aaattttcttcgctttctagcccactgtgtttcctaatacttcatctaac
tggccccaggcttactctctaggttagatgcttgggactggtagcaacaa
tgtctgtggagtgaaggatgtcttattcttagctttcaaagatttattta
tttatttgttttctatatattatattttaacttcaatatattcaatttat
aatgctatatttatatacattgtattttaatttttatatattgaatacat
actgaaaataaaatataatcacattgtttccccttccctttcttcctctc
actgcctccccctcccccctggtcctaccctgttcccctccttttcttta
attcttgatacatacatatccgagtctataaacacaacctggccaattgg
catgctgcttgtatacagatgatgtcagtgctgaccactggcatttagag
tcatatactttatgtggtatgagtgttggctgcatattatctatgttgta
ccaggagaagatgtccggtgaagttagaggaggtgcggggtccctgtgaa
ctgg
gaattccaagctcaaggggagaaagtggcactcccctctctgggactgcc
tggcttaggcagtcacactcaggttcctgcctgcacagagacaccaactc
ctcccgtcccataccctggccagaattttgaattctggacaggcttttga
attttcctgtctacgtataaaacctgtggatcctctgctgttcttgtgcg
ttgattgtattcttttcttttgtaattattggtggattttagcttaagtt
ttggttttggttttgattttggttttggttttaggctagcatccacacct
gaggaaaatgcaagtgcaaagagatctgcactccagaacccgcccagtct
tcccatctctaatatttatgaataatgtattgaactgatagaaaaaatgt
tgaatatgttcattatgaattatattcatcagtgtgttgcctggaatata
aaagagcaaagcagttgcagtgttactacttccttacaatatatgcactg
gtacaacagagctctgtgtccgttcctagtccactgtgtgccatccccaa
aagtgcacgctgcatatctgtgcagtaactgaagaggaggacctgatggg
atgacagacagcagaggttcaacggcattcagagtaggctcaggctccta
cacggaagcagccatggagagggattgatggtgcagtggcctttgaaagg
agtcacgttcacacagcagacattactcaaatgtgtcaggtgcagagaat
gtcaccggtcctaccatcaaaaaagagattcacaatcttgatcctgatat
ttttttccagattaatacaaataactatttgttggccttttgaaagtaaa
cagaatgaaagaaaattcatattaatatttataaggatagcttcaaaatc
catttatgcttttcttaggtttcctcattattcattatgtttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43658163_43659265
seq2: B6Ng01-013E14.b_44_1147 (reverse)

seq1  CCAGTTCCAGGGGACCCGGCACCCTCCTCTGACTTCCACGGACATC-TCT  49
      |||||||   ||||||| ||| |||||||| |||||  |||||||| |||
seq2  CCAGTTCACAGGGACCCCGCA-CCTCCTCTAACTTCACCGGACATCTTCT  49

seq1  CCTGGTAC-ACATAGAT-ATATGCAGGCAAAACACTCATA-CACATAAAG  96
      |||||||| |||||||| |||||||| |  |||||||||| |||||||||
seq2  CCTGGTACAACATAGATAATATGCAGCC--AACACTCATACCACATAAAG  97

seq1  TATATGACTCTAAATGCCAGTGGTCAGCACTGACATCATCTGTATACAAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGACTCTAAATGCCAGTGGTCAGCACTGACATCATCTGTATACAAG  147

seq1  CAGCATGCCAATTGGCCAGGTTGTGTTTATAGACTCGGATATGTATGTAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGCCAATTGGCCAGGTTGTGTTTATAGACTCGGATATGTATGTAT  197

seq1  CAAGAATTAAAGAAAAGGAGGGGAACAGGGTAGGACCAGGGGGGAGGGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAAGAATTAAAGAAAAGGAGGGGAACAGGGTAGGACCAGGGGGGA-GGGG  246

seq1  GAGGCAGTGAGAGGAAGAAAGGGAAGGGGAAACAATGTGATTATATTTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTGAGAGGAAGAAAGGGAAGGGGAAACAATGTGATTATATTTTA  296

seq1  ATTTCAGTATGTATTCAATATATAAAAATTAAAATACAATGTATATAAAT  346
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTATGTATTCAATATATAAAAATTAAAATACAATGTATATAAAT  346

seq1  ATAGCATTATAAATTGAATATATTGAAGTTAAAATATAATATATAG-AAA  395
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAGCATTATAAATTGAATATATTGAAGTTAAAATATAATATATAGAAAA  396

seq1  CAAATAAATAAATAAATCTTTGAAAGCTAAGAATAAGACATCCTTCACTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATAAATAAATCTTTGAAAGCTAAGAATAAGACATCCTTCACTC  446

seq1  CACAGACATTGTTGCTACCAGTCCCAAGCATCTAACCTAGAGAGTAAGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATTGTTGCTACCAGTCCCAAGCATCTAACCTAGAGAGTAAGCC  496

seq1  TGGGGCCAGTTAGATGAAGTATTAGGAAACACAGTGGGCTAGAAAGCGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCAGTTAGATGAAGTATTAGGAAACACAGTGGGCTAGAAAGCGAA  546

seq1  GAAAATTTCAGTAAAGTAGAAAACAGTGTGCGCATCACAGGCTGAATTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCAGTAAAGTAGAAAACAGTGTGCGCATCACAGGCTGAATTCT  596

seq1  CTAAAATGTTTTTATAGCGAATTGAACTGGATGAGCTGGGCTTAAAGGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGTTTTTATAGCGAATTGAACTGGATGAGCTGGGCTTAAAGGGC  646

seq1  CGAGGAAACCAGACCAAAAAGAATTGAGAATATTTTAGCTCATCACAGAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAAACCAGACCAAAAAGAATTGAGAATATTTTAGCTCATCACAGAC  696

seq1  AGTAGTTACAAGACAGCAAGAATTCCTGAGAAAGCTTGACAGCCATGTAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTACAAGACAGCAAGAATTCCTGAGAAAGCTTGACAGCCATGTAT  746

seq1  CACAACTTTGTGATATAGGACAGAACTGTAACCTCACTTCTTACATACAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTTGTGATATAGGACAGAACTGTAACCTCACTTCTTACATACAA  796

seq1  AACAATGGAGACCTTGAAAAGTTGAGTAAGGAGCTTAAAATCATGCAGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGAGACCTTGAAAAGTTGAGTAAGGAGCTTAAAATCATGCAGTC  846

seq1  AGTGCCCAGTTAGAAACTTAAAATCCAGCCTCCTCCCCCAACTCTTTCAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCAGTTAGAAACTTAAAATCCAGCCTCCTCCCCCAACTCTTTCAG  896

seq1  CCAATGGCCTCTTAAACTCAAGGCAATAAATGTCTCATTTTTGCCATGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGCCTCTTAAACTCAAGGCAATAAATGTCTCATTTTTGCCATGTG  946

seq1  TCTTCTACTCCTCAAATTTAGGATGCTAAGTTCTCAACCTACAGTAGTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACTCCTCAAATTTAGGATGCTAAGTTCTCAACCTACAGTAGTAT  996

seq1  GGGGAGGCCCAGTGCAGCCAATGAGTTCTGAAGACTAAAGGAACTACAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGCCCAGTGCAGCCAATGAGTTCTGAAGACTAAAGGAACTACAAG  1046

seq1  AGCCCCAGCACCCAGTACACAACCTCTATGATGCACCAAACTCATAGTAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGCACCCAGTACACAACCTCTATGATGCACCAAACTCATAGTAG  1096

seq1  GTGAATTC  1103
      ||||||||
seq2  GTGAATTC  1104

seq1: chr16_43516135_43517089
seq2: B6Ng01-013E14.g_67_1010

seq1  GAATTCCAAGCTCAAGGGGAGAAAGTGGCACTCCCCTCTCTGGGACTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTCAAGGGGAGAAAGTGGCACTCCCCTCTCTGGGACTGCC  50

seq1  TGGCTTAGGCAGTCACACTCAGGTTCCTGCCTGCACAGAGACACCAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGGCAGTCACACTCAGGTTCCTGCCTGCACAGAGACACCAACTC  100

seq1  CTCCCGTCCCATACCCTGGCCAGAATTTTGAATTCTGGACAGGCTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGTCCCATACCCTGGCCAGAATTTTGAATTCTGGACAGGCTTTTGA  150

seq1  ATTTTCCTGTCTACGTATAAAACCTGTGGATCCTCTGCTGTTCTTGTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGTCTACGTATAAAACCTGTGGATCCTCTGCTGTTCTTGTGCG  200

seq1  TTGATTGTATTCTTTTCTTTTGTAATTATTGGTGGATTTTAGCTTAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGTATTCTTTTCTTTTGTAATTATTGGTGGATTTTAGCTTAAGTT  250

seq1  TTGGTTTTGGTTTTGATTTTGGTTTTGGTTTTAGGCTAGCATCCACACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTGGTTTTGATTTTGGTTTTGGTTTTAGGCTAGCATCCACACCT  300

seq1  GAGGAAAATGCAAGTGCAAAGAGATCTGCACTCCAGAACCCGCCCAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAATGCAAGTGCAAAGAGATCTGCACTCCAGAACCCGCCCAGTCT  350

seq1  TCCCATCTCTAATATTTATGAATAATGTATTGAACTGATAGAAAAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTCTAATATTTATGAATAATGTATTGAACTGATAGAAAAAATGT  400

seq1  TGAATATGTTCATTATGAATTATATTCATCAGTGTGTTGCCTGGAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGTTCATTATGAATTATATTCATCAGTGTGTTGCCTGGAATATA  450

seq1  AAAGAGCAAAGCAGTTGCAGTGTTACTACTTCCTTACAATATATGCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAAAGCAGTTGCAGTGTTACTACTTCCTTACAATATATGCACTG  500

seq1  GTACAACAGAGCTCTGTGTCCGTTCCTAGTCCACTGTGTGCCATCCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACAGAGCTCTGTGTCCGTTCCTAGTCCACTGTGTGCCATCCCCAA  550

seq1  AAGTGCACGCTGCATATCTGTGCAGTAACTGAAGAGGAGGACCTGATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCACGCTGCATATCTGTGCAGTAACTGAAGAGGAGGACCTGATGGG  600

seq1  ATGACAGACAGCAGAGGTTCAACGGCATTCAGAGTAGGCTCAGGCTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGACAGCAGAGGTTCAACGGCATTCAGAGTAGGCTCAGGCTCCTA  650

seq1  CACGGAAGCAGCCATGGAGAGGGATTGATGGTGCAGTGGCCTTTGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGAAGCAGCCATGGAGAGGGATTGATGGTGCAGTGGCCTTTGAAAGG  700

seq1  AGTCACGTTCACACAGCAGACATTACTCAAATGTGTCAGGTGCAGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACGTTCACACAGCAGACATTACTCAAATGTGTCAGGTGCAGAGAAT  750

seq1  GTCACCGGTCCTACCATCAAAAAAGAGATTCACAATCTTGATCCTGATA-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTCACCGGTCCTACCATCAAAAAAGAGATTCACAATCTTGATCCTGATAT  800

seq1  TTTTTTCCAGATTAATACAAATAACTAATTTGTT-GCCATTTGAAAGTAA  848
      |||||||||||||||||||||||||| ||||||| ||| |||||||||||
seq2  TTTTTTCCAGATTAATACAAATAACT-ATTTGTTGGCCTTTTGAAAGTAA  849

seq1  ACAAGAATGAAAGAAAATTCATAATTAAATATTTATAAGGAATAGCTTCA  898
      || ||||||||||||||||||||  | ||||||||||||| |||||||||
seq2  AC-AGAATGAAAGAAAATTCATA--TTAATATTTATAAGG-ATAGCTTCA  895

seq1  AAAATTCATTTTATGCTTTTTCTTTATGGTTTTCCTTCATTATTTCATTA  948
      |||  ||  ||||||| |||||||   |||||  | |||||| |||||||
seq2  AAA--TCCATTTATGC-TTTTCTT--AGGTTT--CCTCATTA-TTCATTA  937

seq1  TGTTTAG  955
      |||||||
seq2  TGTTTAG  944