BAC Information

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BAC

Clone NameB6Ng01-014D01
Chromosome16 (Build37)
Map Location 6,452,304 - 6,611,590
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042436, LOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014D01.bB6Ng01-014D01.g
ACCDH848804DH848805
length1,0351,171
definitionDH848804|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D01, 5' end.DH848805|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,610,559 - 6,611,590)(6,452,304 - 6,453,476)
sequence
gaattcactttctactacacatatagaagttgagtattgtagtatatatc
tttaatccaactatggagaagcagacaaacagggtatccctcgagcttct
tggccaggcagtctagccaaatggatgatctccatgtacagttacagtcc
ctatctcaaaaaaaagttaatgtaaaaatggagctgagaaagacattttg
acttccatatgcacaacacaagccacacacacacacacacacacacacac
acacacacacacacacacacacacacacactcactcacaaatacagcaaa
atcatgaccacaagtgtcaatattttccaggctggctcagtgaaatagta
tagttcaaaataagaaaaaaataaaaataaaaatgtcagaagtgaaatac
cctggaaagtgttaaatactggaatcagaagacaggtacaacagcacaga
gcttaaggtgactgggtatttggcaacttgacaactgacaagtagggaat
acatgattgagtagagaaatgtgcattatttagaaggtagaacagatgaa
tgaagctggtgtaaagcattgtgtctttgacatgaaatccagagattgtt
tgacttttaattatcagatgatatctttgtgggtatttgtttattttttt
attagatattttcctcatttacatttcaaatgttatcccccttttcctag
tttcctctccaaaagtcccctataccctccccctgccctgctccccaacc
cacccactctggcttcctggccctggcattcccctgtactggggcatatg
atcttcacaagaccaagggcctctcctcccactgacaggtcgtgtgctgt
gtaaacagcgtcttatgtatcccacactgagctttgaactccttatgttt
gaaaaattgcttcaaactcttgatctttcagcctcaactggtgttgaggg
ctacgggtataaggcatgggctaccattgaaaaactgtattttatctttt
cttaaacttggaaattggaggtcttcaaatttaga
gaattcaaagatcagcctcaggtattattccttaggttccaaaccccatg
gctttggtgatgggatctcccaccagcatctggagctccctaattatgca
aggctggctggacttggccagtgatcaccaaggatcctgtctctatcctc
tcaacactggaactgcaggcacgcaccaccatgctcatctttgtacatgc
gttctgggggttgaactcatatcctcacgtttgtgaggcaagtccttcac
cacctgcacttggcttttccagtcatggatccatcctttctggggcttcc
tgttgcttttgttgcatcttagaaagaggcaagaggagcccgcatttctc
aggagcaattaagaccactttctgcactcctcggatggacaggcagcaac
acacagctgcaaactagaatcatcgtgcctgggatagacagagtactcat
catgaccatttatcatcagcagagattgcaaaaaggaagaataatgattt
cattaatttctgccagtgagccctcatcacgtcacatcatttcctgcatc
cttgaagccaagttacataagtgatacagtatagagctgcatgtagggga
atcaccatcaccacagagaattgtcaccatggcgaaccttaaccatggca
aacctgttgaatcattctttccctgttctgcaaaggggtgattacatggg
tctggatcttgattttcattaaggacaggatgctcaaaactttggactca
gagtctcagaagcaagatcctggtgtaatagaatgggcttaaagggtagg
gtagcctctggaaatgaaacacaaggttgcaagacttcattctgtgcccc
tccccgctccaaatataatcttatgtgatagctctgttttaaatgttgaa
attagtctgttgataagtcttgctgtcatgttctgcaaatgaaaaagatc
tggtgtctgcattctgtggtagcctggttactcttgttctatatacccaa
acctgcacattgtcagattctcccagaaagcttttaaatctttatggctt
ggctggcctccttagctacatgtagaactttgggtatagtggccttagcc
ctgggttaggcaaatctgactaatagtaacccagatatatgcagggttcc
gctccttcttccagagagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_6610559_6611590
seq2: B6Ng01-014D01.b_45_1079 (reverse)

seq1  TCTAAATTTGAAGACCT-CAATTTTCAAGTTAAAG-ATAGAT-AAATACA  47
      ||||||||||||||||| |||||| |||||| ||| | |||| |||||||
seq2  TCTAAATTTGAAGACCTCCAATTTCCAAGTTTAAGAAAAGATAAAATACA  50

seq1  GTTTTTC-ATGGTAGCACATGCCTATTACCC-TAGCACTCAACCACAGTT  95
      ||||||| |||||||| |||||||  ||||| |||| ||||||  |||||
seq2  GTTTTTCAATGGTAGCCCATGCCTTATACCCGTAGCCCTCAACACCAGTT  100

seq1  GAGGCTGAAAGATCAAGAGTTTGAAGCAATTTTTCCAACATAAGGAGTTC  145
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGGCTGAAAGATCAAGAGTTTGAAGCAATTTTTCAAACATAAGGAGTTC  150

seq1  -AAGCTCAGTGTGGGATACATAAGACGCTGTTTACACAGCACACGACCTG  194
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCAGTGTGGGATACATAAGACGCTGTTTACACAGCACACGACCTG  200

seq1  TCAGTGGGAGGAGAGGCCCTTGGTCTTGTGAAGATCATATGCCCCAGTAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGAGGAGAGGCCCTTGGTCTTGTGAAGATCATATGCCCCAGTAC  250

seq1  AGGGGAATGCCAGGGCCAGGAAGCCAGAGTGGGTGGGTTGGGGAGCAGGG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATGCCAGGGCCAGGAAGCCAGAGTGGGTGGGTTGGGGAGCAGGG  300

seq1  CAGGGGGAGGGTATAGGGGACTTTTGGAGAGGAAACTAGG-AAAGGGGGA  343
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGGGGGAGGGTATAGGGGACTTTTGGAGAGGAAACTAGGAAAAGGGGGA  350

seq1  TAACATTTGAAATGTAAATGAGGAAAATATCTAATAAAAAAATAAACAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTGAAATGTAAATGAGGAAAATATCTAATAAAAAAATAAACAAA  400

seq1  TACCCACAAAGATATCATCTGATAATTAAAAGTCAAACAATCTCTGGATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACAAAGATATCATCTGATAATTAAAAGTCAAACAATCTCTGGATT  450

seq1  TCATGTCAAAGACACAATGCTTTACACCAGCTTCATTCATCTGTTCTACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAAAGACACAATGCTTTACACCAGCTTCATTCATCTGTTCTACC  500

seq1  TTCTAAATAATGCACATTTCTCTACTCAATCATGTATTCCCTACTTGTCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATAATGCACATTTCTCTACTCAATCATGTATTCCCTACTTGTCA  550

seq1  GTTGTCAAGTTGCCAAATACCCAGTCACCTTAAGCTCTGTGCTGTTGTAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAAGTTGCCAAATACCCAGTCACCTTAAGCTCTGTGCTGTTGTAC  600

seq1  CTGTCTTCTGATTCCAGTATTTAACACTTTCCAGGGTATTTCACTTCTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTGATTCCAGTATTTAACACTTTCCAGGGTATTTCACTTCTGA  650

seq1  CATTTTTATTTTTATTTTTTTCTTATTTTGAACTATACTATTTCACTGAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTTTTATTTTTTTCTTATTTTGAACTATACTATTTCACTGAG  700

seq1  CCAGCCTGGAAAATATTGACACTTGTGGTCATGATTTTGCTGTATTTGTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGGAAAATATTGACACTTGTGGTCATGATTTTGCTGTATTTGTG  750

seq1  AGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  793
      |||||    |||||||||||||||||||||||||||||||||||||||||
seq2  AGTGA----GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  796

seq1  TGTGTGTGTGTGTGTGGCTTGTGTTGTGCATATGGAAGTCAAAATGTCTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGGCTTGTGTTGTGCATATGGAAGTCAAAATGTCTT  846

seq1  TCTCAGCTCCATTTTTACATTAACTTTTTTTTGAGATAGGGACTGTAACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTCCATTTTTACATTAACTTTTTTTTGAGATAGGGACTGTAACT  896

seq1  GTACATGGAGATCATCCATTTGGCTAGACTGCCTGGCCAAGAAGCTCGAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGGAGATCATCCATTTGGCTAGACTGCCTGGCCAAGAAGCTCGAG  946

seq1  GGATACCCTGTTTGTCTGCTTCTCCATAGTTGGATTAAAGATATATACTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCCTGTTTGTCTGCTTCTCCATAGTTGGATTAAAGATATATACTA  996

seq1  CAATACTCAACTTCTATATGTGTAGTAGAAAGTGAATTC  1032
      |||||||||||||||||||||||||||||||||||||||
seq2  CAATACTCAACTTCTATATGTGTAGTAGAAAGTGAATTC  1035

seq1: chr16_6452304_6453476
seq2: B6Ng01-014D01.g_67_1237

seq1  GAATTCAAAGATCAGCCTCAGGTATTATTCCTTAGGTTCCAAACCCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATCAGCCTCAGGTATTATTCCTTAGGTTCCAAACCCCATG  50

seq1  GCTTTGGTGATGGGATCTCCCACCAGCATCTGGAGCTCCCTAATTATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTGATGGGATCTCCCACCAGCATCTGGAGCTCCCTAATTATGCA  100

seq1  AGGCTGGCTGGACTTGGCCAGTGATCACCAAGGATCCTGTCTCTATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCTGGACTTGGCCAGTGATCACCAAGGATCCTGTCTCTATCCTC  150

seq1  TCAACACTGGAACTGCAGGCACGCACCACCATGCTCATCTTTGTACATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTGGAACTGCAGGCACGCACCACCATGCTCATCTTTGTACATGC  200

seq1  GTTCTGGGGGTTGAACTCATATCCTCACGTTTGTGAGGCAAGTCCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGGGTTGAACTCATATCCTCACGTTTGTGAGGCAAGTCCTTCAC  250

seq1  CACCTGCACTTGGCTTTTCCAGTCATGGATCCATCCTTTCTGGGGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCACTTGGCTTTTCCAGTCATGGATCCATCCTTTCTGGGGCTTCC  300

seq1  TGTTGCTTTTGTTGCATCTTAGAAAGAGGCAAGAGGAGCCCGCATTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTTTGTTGCATCTTAGAAAGAGGCAAGAGGAGCCCGCATTTCTC  350

seq1  AGGAGCAATTAAGACCACTTTCTGCACTCCTCGGATGGACAGGCAGCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAATTAAGACCACTTTCTGCACTCCTCGGATGGACAGGCAGCAAC  400

seq1  ACACAGCTGCAAACTAGAATCATCGTGCCTGGGATAGACAGAGTACTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGCAAACTAGAATCATCGTGCCTGGGATAGACAGAGTACTCAT  450

seq1  CATGACCATTTATCATCAGCAGAGATTGCAAAAAGGAAGAATAATGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCATTTATCATCAGCAGAGATTGCAAAAAGGAAGAATAATGATTT  500

seq1  CATTAATTTCTGCCAGTGAGCCCTCATCACGTCACATCATTTCCTGCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTCTGCCAGTGAGCCCTCATCACGTCACATCATTTCCTGCATC  550

seq1  CTTGAAGCCAAGTTACATAAGTGATACAGTATAGAGCTGCATGTAGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGCCAAGTTACATAAGTGATACAGTATAGAGCTGCATGTAGGGGA  600

seq1  ATCACCATCACCACAGAGAATTGTCACCATGGCGAACCTTAACCATGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATCACCACAGAGAATTGTCACCATGGCGAACCTTAACCATGGCA  650

seq1  AACCTGTTGAATCATTCTTTCCCTGTTCTGCAAAGGGGTGATTACATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTGAATCATTCTTTCCCTGTTCTGCAAAGGGGTGATTACATGGG  700

seq1  TCTGGATCTTGATTTTCATTAAGGACAGGATGCTCAAAAC-TTGGACTCA  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGGATCTTGATTTTCATTAAGGACAGGATGCTCAAAACTTTGGACTCA  750

seq1  GAGTCTCAGAAGCAAGATCCTGGTGTAATAGAAT-GGCTTAAAGGGTAGG  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGTCTCAGAAGCAAGATCCTGGTGTAATAGAATGGGCTTAAAGGGTAGG  800

seq1  GTAGCCTCTGGAAATGAAACAC-AGGTTGCAAGAACTTCA-TCTGTGCCC  846
      |||||||||||||||||||||| |||||||||| |||||| |||||||||
seq2  GTAGCCTCTGGAAATGAAACACAAGGTTGCAAG-ACTTCATTCTGTGCCC  849

seq1  CTCCCCGCTCCAAATATAATCTTATGTGATAGCTCTGTTTTAAATGTTGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGCTCCAAATATAATCTTATGTGATAGCTCTGTTTTAAATGTTGA  899

seq1  AATTAGTCTGTTGATAAGTCTGGCTGTCATGTTCTGCAAA-GGAAAAGAT  945
      ||||||||||||||||||||| |||||||||||||||||| | |||||||
seq2  AATTAGTCTGTTGATAAGTCTTGCTGTCATGTTCTGCAAATGAAAAAGAT  949

seq1  CT-GTGTCTGCATTCTGTGTGAGCCTGGTTACTCTTGTATCTATATAACC  994
      || ||||||||||||||||  ||||||||||||||||| |||||||| ||
seq2  CTGGTGTCTGCATTCTGTGGTAGCCTGGTTACTCTTGT-TCTATATACCC  998

seq1  AAACCTGCACA-TGTCAGAATCTCCCAGAAAGCTTTTAAAAATCTTAGTG  1043
      ||||||||||| ||||||| ||||||||||||||||||||  | |||  |
seq2  AAACCTGCACATTGTCAGATTCTCCCAGAAAGCTTTTAAATCT-TTATGG  1047

seq1  CTAGGCTGG-CTCTATAGCTACATGGTAGAACTTTTGGGTAATGTGCTCT  1092
      || |||||| |||  ||||||||| ||||||| ||||||||  |||  ||
seq2  CTTGGCTGGCCTCCTTAGCTACAT-GTAGAAC-TTTGGGTATAGTGGCCT  1095

seq1  AGGCCCTGGGTTCAGGCCCAAGAACCAGACCAAAATAAGTAACCCAG--A  1140
        |||||||||| ||||     || | ||| ||    ||||||||||  |
seq2  TAGCCCTGGGTT-AGGC----AAATCTGACTAA---TAGTAACCCAGATA  1137

seq1  TAAGCAGTGTTCTCGTCCCTC-TCCAGAGAGAAT  1173
      || |||| ||||   ||| || ||||||||||||
seq2  TATGCAGGGTTCCGCTCCTTCTTCCAGAGAGAAT  1171