BAC Information

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BAC

Clone NameB6Ng01-015C01
Chromosome16 (Build37)
Map Location 21,915,354 - 22,111,640
singlet/doubletdoublet
Overlap geneMap3k13, Tmem41a, Liph, Senp2, EG239760, Igf2bp2
Upstream geneEG625060, LOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, LOC624037
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015C01.bB6Ng01-015C01.g
ACCDH849472DH849473
length883859
definitionDH849472|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C01, 5' end.DH849473|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,110,762 - 22,111,640)(21,915,354 - 21,916,168)
sequence
gaattcccaaagaagtagtcaaaagttttcttctacgtgaaaagacttga
gaagaagtgggccgtgcggtagtgtggagaacaggttttgttctgttgag
acagggtcttccactggaggcttgacctggaacatgtgtggacagtgccc
tcagatgtggggcagttgtgtttctatccctgagtgtgctggtgcagtca
tgagctaccacccgctagaggataccttttatttgttcagtttttaatgt
gccatgtgtgtttgagtgtgccgggccatgacctgtgtgcagagggcagc
tttggacgtccacttctatacaccctcacttgggtcagggtttgaacttc
attctccaggcttgtttgacaagtgcccttaatcccctgtaaaatcccct
tgataaagacagaaagaacttttgtcaaaactggggacctccttacctgc
taaagaaactgaactagtctctgtccagagtttgaaacaatagcgaagac
cttgtaaaaacatgatataatactctatttagccagtcttcaatcctagg
gtttgtgacagtactgtaacacaaggtcagagagaggtgagggatcagag
tattaacagtttagagagcttttacataaaacaacagctttacaatctac
gtgttttaattaaggatttatttatgtatataagtgctctattttgcatg
tatgtctgcgtgacagaagagagcatcagattcaattaaagatggttggg
agccacaaagtgggttgctgggattgaactcagaaccccctgaaagagca
gccggtgttcttaacagcggagcaattctttctccccctaaaaatttaga
tttcttatttactaacctagctttctttggggg
gaattctcacatgccgaagaactggctccatcccagacaggttaacagaa
ggagagaatgtcccaagcctgagcttgtaagagttgaaccaagtgcagtt
aaaacaaaaacaaaaacaaacaaaaacaaaaaaacccaggaaggagaaaa
cgcaggccaagaatgtgttttttacttttaagtacaaataagaaagtagc
agggggttttatggcatttccaaacactctcagatctcattgaggccacc
actctcttctctctcttcttctccacctcccatattcctgctcctcatcc
ctgcttgaaccccagcctcctccccttcttcctcagaagccctgccctga
ctctccagggcctcttcctcatttcctgacctctacacatgctcactggc
acataaagacatgtgtctacatcagaagctgggattcacatatgacagag
aacatggagtgtttgtgtctgagcctgggttaccttaatagttttcagat
ccatctattttcctgaattatccatcatttcggttttctttacagctgaa
taaaattctgcagtacgcatgtacctcgttcccattaccctctgttctgt
ggatgggtaacgaggctgcagtaaacatgtgtacacatgattctctgtgg
tagggcacgcagtccgtcaggtatttccacaggagtggtaaaactggtca
tgtggggactcgagctctttgatctccacagcggcaggaccagttttaca
ctcccgccagtggtaaataagttcctcctcacatcctggccagcactggc
tgtcatttgtttttctttgatgagagtactgactgaggtgagaaggaact
cacagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22110762_22111640
seq2: B6Ng01-015C01.b_41_923 (reverse)

seq1  CCCCCAAAGAAAGCTA-GCTAGTAAATTAAGAAATCTAGATTTTTAGGGG  49
      |||||||||||||||| | ||||||| ||||||||||| |||||||||||
seq2  CCCCCAAAGAAAGCTAGGTTAGTAAA-TAAGAAATCTAAATTTTTAGGGG  49

seq1  CTGAAGAAATGGCTCAGCTGTTAAGAGCACTGGCTGCTCTTTCA-GAGGT  98
        |||  ||| |||| |||||||||| ||| ||||||||||||| | |||
seq2  GAGAAAGAATTGCTCCGCTGTTAAGAACACCGGCTGCTCTTTCAGGGGGT  99

seq1  TCTGAGTTCAATTCCCAGCAA-CCACTTTGTGGCTCACAACCATCTTTAA  147
      ||||||||||| ||||||||| |||||||||||||| |||||||||||||
seq2  TCTGAGTTCAA-TCCCAGCAACCCACTTTGTGGCTCCCAACCATCTTTAA  148

seq1  TTGAATCTGATGCTCTCTTCTGTCACGCAGACATACATGC-AAATAGAGC  196
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAATCTGATGCTCTCTTCTGTCACGCAGACATACATGCAAAATAGAGC  198

seq1  ACTTATATACATAAATAAATCCTTAATT-AAACACGTAGATTGTAAAGCT  245
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTTATATACATAAATAAATCCTTAATTAAAACACGTAGATTGTAAAGCT  248

seq1  GTTG-TTTATGTAAAAGCTCTCTAAACTGTTAATACTCTGATCCCTCACC  294
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTATGTAAAAGCTCTCTAAACTGTTAATACTCTGATCCCTCACC  298

seq1  TCTCTCTGACCTTGTGTTACAGTACTGTCACAAACCCTAGGATTGAAGAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGACCTTGTGTTACAGTACTGTCACAAACCCTAGGATTGAAGAC  348

seq1  TGGCTAAATAGAGTATTATATCATGTTTTTACAAGGTCTTCGCTATTGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAAATAGAGTATTATATCATGTTTTTACAAGGTCTTCGCTATTGTT  398

seq1  TCAAACTCTGGACAGAGACTAGTTCAGTTTCTTTAGCAGGTAAGGAGGTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCTGGACAGAGACTAGTTCAGTTTCTTTAGCAGGTAAGGAGGTC  448

seq1  CCCAGTTTTGACAAAAGTTCTTTCTGTCTTTATCAAGGGGATTTTACAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTTGACAAAAGTTCTTTCTGTCTTTATCAAGGGGATTTTACAGG  498

seq1  GGATTAAGGGCACTTGTCAAACAAGCCTGGAGAATGAAGTTCAAACCCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGGGCACTTGTCAAACAAGCCTGGAGAATGAAGTTCAAACCCTG  548

seq1  ACCCAAGTGAGGGTGTATAGAAGTGGACGTCCAAAGCTGCCCTCTGCACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGTGAGGGTGTATAGAAGTGGACGTCCAAAGCTGCCCTCTGCACA  598

seq1  CAGGTCATGGCCCGGCACACTCAAACACACATGGCACATTAAAAACTGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATGGCCCGGCACACTCAAACACACATGGCACATTAAAAACTGAA  648

seq1  CAAATAAAAGGTATCCTCTAGCGGGTGGTAGCTCATGACTGCACCAGCAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAAGGTATCCTCTAGCGGGTGGTAGCTCATGACTGCACCAGCAC  698

seq1  ACTCAGGGATAGAAACACAACTGCCCCACATCTGAGGGCACTGTCCACAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGATAGAAACACAACTGCCCCACATCTGAGGGCACTGTCCACAC  748

seq1  ATGTTCCAGGTCAAGCCTCCAGTGGAAGACCCTGTCTCAACAGAACAAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCAGGTCAAGCCTCCAGTGGAAGACCCTGTCTCAACAGAACAAAA  798

seq1  CCTGTTCTCCACACTACCGCACGGCCCACTTCTTCTCAAGTCTTTTCACG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTCCACACTACCGCACGGCCCACTTCTTCTCAAGTCTTTTCACG  848

seq1  TAGAAGAAAACTTTTGACTACTTCTTTGGGAATTC  879
      |||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAAACTTTTGACTACTTCTTTGGGAATTC  883

seq1: chr16_21915354_21916168
seq2: B6Ng01-015C01.g_68_884

seq1  GAATTCTCACATGCCGAAGAACTGGCTCCATCCCAGACAGGTTAACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACATGCCGAAGAACTGGCTCCATCCCAGACAGGTTAACAGAA  50

seq1  GGAGAGAATGTCCCAAGCCTGAGCTTGTAAGAGTTGAACCAAGTGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAATGTCCCAAGCCTGAGCTTGTAAGAGTTGAACCAAGTGCAGTT  100

seq1  AAAACAAAAACAAAAACAAACAAAAACAAAAAAACCCAGGAAGGAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAACAAAAACAAACAAAAACAAAAAAACCCAGGAAGGAGAAAA  150

seq1  CGCAGGCCAAGAATGTGTTTTTTACTTTTAAGTACAAATAAGAAAGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGCCAAGAATGTGTTTTTTACTTTTAAGTACAAATAAGAAAGTAGC  200

seq1  AGGGGGTTTTATGGCATTTCCAAACACTCTCAGATCTCATTGAGGCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTTTTATGGCATTTCCAAACACTCTCAGATCTCATTGAGGCCACC  250

seq1  ACTCTCTTCTCTCTCTTCTTCTCCACCTCCCATATTCCTGCTCCTCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTCTCTCTCTTCTTCTCCACCTCCCATATTCCTGCTCCTCATCC  300

seq1  CTGCTTGAACCCCAGCCTCCTCCCCTTCTTCCTCAGAAGCCCTGCCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGAACCCCAGCCTCCTCCCCTTCTTCCTCAGAAGCCCTGCCCTGA  350

seq1  CTCTCCAGGGCCTCTTCCTCATTTCCTGACCTCTACACATGCTCACTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGGGCCTCTTCCTCATTTCCTGACCTCTACACATGCTCACTGGC  400

seq1  ACATAAAGACATGTGTCTACATCAGAAGCTGGGATTCACATATGACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGACATGTGTCTACATCAGAAGCTGGGATTCACATATGACAGAG  450

seq1  AACATGGAGTGTTTGTGTCTGAGCCTGGGTTACCTTAATAGTTTTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAGTGTTTGTGTCTGAGCCTGGGTTACCTTAATAGTTTTCAGAT  500

seq1  CCATCTATTTTCCTGAATTATCCATCATTTCGGTTTTCTTTACAGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTATTTTCCTGAATTATCCATCATTTCGGTTTTCTTTACAGCTGAA  550

seq1  TAAAATTCTGCAGTACGCATGTACCTCGTTCCCATTACCCTCTGTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTGCAGTACGCATGTACCTCGTTCCCATTACCCTCTGTTCTGT  600

seq1  GGATGGGTAACGAGGCTGCAGTAAACATGTGTACACATGATTCTCTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTAACGAGGCTGCAGTAAACATGTGTACACATGATTCTCTGTGG  650

seq1  TAGGGCACGCAGTCCGTCAGGTATTTCCACAGGAGTGGTAAAACTGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCACGCAGTCCGTCAGGTATTTCCACAGGAGTGGTAAAACTGGTCA  700

seq1  TGTGGGGACTCGAGCTC-TTGATCTCCACAGCGGCAGGACCAG-TTTACA  748
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  TGTGGGGACTCGAGCTCTTTGATCTCCACAGCGGCAGGACCAGTTTTACA  750

seq1  CTCCCGCCAGTGGTAAATAAGTTCCTCCTCACATCCTGGCCAGCACTGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGCCAGTGGTAAATAAGTTCCTCCTCACATCCTGGCCAGCACTGGC  800

seq1  TGTCATTTGTTTTTCTT  815
      |||||||||||||||||
seq2  TGTCATTTGTTTTTCTT  817