BAC Information

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BAC

Clone NameB6Ng01-016D16
Chromosome16 (Build37)
Map Location 41,266,855 - 41,360,651
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG667450, Lsamp, Gap43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016D16.bB6Ng01-016D16.g
ACCDH850258DH850259
length1,111699
definitionDH850258|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D16, 5' end.DH850259|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,359,553 - 41,360,651)(41,266,855 - 41,267,553)
sequence
gaattctcagaaaatagaaaccatctgtttcaaagcatgacaaggaagaa
gaaatggctctgaaagcatatcatagtgggctgggctcatcctataggtc
ctttgaaaactaaaccatcatgaagggtttgcacataagagtgatgggtt
tgagaatgagactcatgtaaccgtaaatggcaaacactgctgaggatcat
tagaaatgttaactttccagacttgaaagatggcacagttgagaaagtgc
ttgccatccagcagggaggacctgagtttcatccctggcacccatgtgaa
aaaaccaggcatgagggcacattcttgtaattccagtgaggaagaggtga
agacggttggttatctgggaggttcctgggcagccaatgatagactctgt
gtccaaaatgaagttgaaacaccactgctgaaggacacctaagtctgccc
tctaccctctacttgcttatacatgcatgcactcacagaaacatgtgaca
tacactcctgtttttgtcatttgaacatttgctgccctcccacaaataca
cacacacacacacacatacacacacacttttatcaataaaatttggagaa
gccctttttaaaaactatatatatatatttcaaaatctctactcccatga
aaatgttaaccttgaagagttctagcagctattttgatgacttaaagaag
cttcattcttctggaaagaaaggaatagaagacatgttcagtgttatctc
atatcttacttcacattaaagctctaagcttacataagaacagagcctgc
tgtaagaagggaacacattataagtaagtgttgtgataaacaaagatgta
ggcacgcagcaagcagcgatacaacctgtgcttatgccccagatttggag
ggttggtcagctaatgagagtggagtagggtcctgtccatttctcatttc
atacaagaacactactgtaactagaagaatgatgatactttctatagcta
catcatgggaataatcaaaggacaccggggattggtggaccaggttccac
attactggtacaacaggcctgtgagtttcattccgctgtactggaccgag
ctttcagataa
gaattcatatagataatgtgaagggtgattgttttgataaaagtaatttg
aactaatagaaacattcacaattagagtaaacttttatcagtgaagtata
caaaggatgaggttcaagtggagaaacatcgttccatcacctgatacttg
tttttctctctacaatacattacaattctgaacttttattctccaataaa
atcaaatagtctggcctgggttattatgtcactatattctcattcactta
taattattaatcatctaccatgaaataagtcatacctcatctccaatttt
tataactgctcctgtgatatttctctatcctcattttctacttttacatt
agtatggatttgacgccatcccgctaacatttcaccataacaggcatatt
aagttacacacttatgtatgtaatttatcagataggatgaatgtttctca
agaagttcatgttctatactgagacttagaacgttaatgctcagcaagta
gcttggtagttgttccatgataatcataattgtgacttgaaataaatata
cagattatagtggtttgaataagagtagatcccatagaccacatagtgtt
tgaatgcttggcccatagggagtggcaccattaggaggtatagactgttg
gagtaggtgtggtcttgttagaggaagtatgtcactgtgggggtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_41359553_41360651
seq2: B6Ng01-016D16.b_41_1151 (reverse)

seq1  TTATCTG-AAGCACGGT-CAATACAGCGGAA-GAAACTC-CAGG-CTGTT  45
      ||||||| |||| |||| || |||||||||| ||||||| |||| |||||
seq2  TTATCTGAAAGCTCGGTCCAGTACAGCGGAATGAAACTCACAGGCCTGTT  50

seq1  GTA-CAGTAATGTGGAACTGTGTC--TCCATCCCCGTTG-CCTTTGA-TA  90
      ||| ||||||||||||||   |||   | ||||||| || ||||||| ||
seq2  GTACCAGTAATGTGGAACCTGGTCCACCAATCCCCGGTGTCCTTTGATTA  100

seq1  TTGCCATGTTGTAGCTAAAGAAATTATCAT-ATTC-TCTAGTTACAGTAG  138
      || ||||| |||||||| ||||| |||||| |||| ||||||||||||||
seq2  TTCCCATGATGTAGCTATAGAAAGTATCATCATTCTTCTAGTTACAGTAG  150

seq1  TGTTATTGTTTGAAATGAGAAATGGATAGGACCCTACTCCACTCTCATTA  188
      |||| |||| |||||||||||||||| |||||||||||||||||||||||
seq2  TGTTCTTGTATGAAATGAGAAATGGACAGGACCCTACTCCACTCTCATTA  200

seq1  GCTTACCAACCCTGCAAATCTGGGGCATAAGCACAGGTTGTATGGCTGCC  238
      ||| ||||||||| ||||||||||||||||||||||||||||| ||||| 
seq2  GCTGACCAACCCTCCAAATCTGGGGCATAAGCACAGGTTGTATCGCTGCT  250

seq1  TGCTGCGTGCCTACATCTTTGTTTATCACAACACTTACTTATAATGTGTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCGTGCCTACATCTTTGTTTATCACAACACTTACTTATAATGTGTT  300

seq1  CCCTTCTTACAGCAGGCTCTGTTCTTATGTAAGCTTAGAGGTTTAATGTG  338
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTTCTTACAGCAGGCTCTGTTCTTATGTAAGCTTAGAGCTTTAATGTG  350

seq1  AAGTAAGATATGAGGTAACACTGAACATGTCTTCTATTCCTTTCTTTCCA  388
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGTAAGATATGAGATAACACTGAACATGTCTTCTATTCCTTTCTTTCCA  400

seq1  GAAGAATGAAGCTTCTTTAAGTCATCAAAATAGCTGCTAGAACTCTTCAA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGAAGCTTCTTTAAGTCATCAAAATAGCTGCTAGAACTCTTCAA  450

seq1  GGTTAACATTTTCATGGGAGTAGAGATTTTGAAATATATATATATAGTTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACATTTTCATGGGAGTAGAGATTTTGAAATATATATATATAGTTT  500

seq1  TTAAAAAGGGCTTCTCCAAATTTTATTGATAAAAGTGTGTGTGTATGTGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGGCTTCTCCAAATTTTATTGATAAAAGTGTGTGTGTATGTGT  550

seq1  GTGTGTGTGTGTGTATTTGTGGGAGGGCAGCAAATGTTCAAATGACAAAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTATTTGTGGGAGGGCAGCAAATGTTCAAATGACAAAA  600

seq1  ACAGGAGTGTATGTCACATGTTTCTGTGAGTGCATGCATGTATAAGCAAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTGTATGTCACATGTTTCTGTGAGTGCATGCATGTATAAGCAAG  650

seq1  TAGAGGGTAGAGGGCAGACTTAGGTGTCCTTCAGCAGTGGTGTTTCAACT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGTAGAGGGCAGACTTAGGTGTCCTTCAGCAGTGGTGTTTCAACT  700

seq1  TCATTTTGGACACAGAGTCTATCATTGGCTGCCCAGGAACCTCCCAGATA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGGACACAGAGTCTATCATTGGCTGCCCAGGAACCTCCCAGATA  750

seq1  ACCAACCGTCTTCACCTCTTCCTCACTGGAATTACAAGAATGTGCCCTCA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCGTCTTCACCTCTTCCTCACTGGAATTACAAGAATGTGCCCTCA  800

seq1  TGCCTGGTTTTTTCACATGGGTGCCAGGGATGAAACTCAGGTCCTCCCTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTTTTTCACATGGGTGCCAGGGATGAAACTCAGGTCCTCCCTG  850

seq1  CTGGATGGCAAGCACTTTCTCAACTGTGCCATCTTTCAAGTCTGGAAAGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGGCAAGCACTTTCTCAACTGTGCCATCTTTCAAGTCTGGAAAGT  900

seq1  TAACATTTCTAATGATCCTCAGCAGTGTTTGCCATTTACGGTTACATGAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTCTAATGATCCTCAGCAGTGTTTGCCATTTACGGTTACATGAG  950

seq1  TCTCATTCTCAAACCCATCACTCTTATGTGCAAACCCTTCATGATGGTTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCTCAAACCCATCACTCTTATGTGCAAACCCTTCATGATGGTTT  1000

seq1  AGTTTTCAAAGGACCTATAGGATGAGCCCAGCCCACTATGATATGCTTTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAAAGGACCTATAGGATGAGCCCAGCCCACTATGATATGCTTTC  1050

seq1  AGAGCCATTTCTTCTTCCTTGTCATGCTTTGAAACAGATGGTTTCTATTT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCATTTCTTCTTCCTTGTCATGCTTTGAAACAGATGGTTTCTATTT  1100

seq1  TCTGAGAATTC  1099
      |||||||||||
seq2  TCTGAGAATTC  1111

seq1: chr16_41266855_41267553
seq2: B6Ng01-016D16.g_65_763

seq1  GAATTCATATAGATAATGTGAAGGGTGATTGTTTTGATAAAAGTAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAGATAATGTGAAGGGTGATTGTTTTGATAAAAGTAATTTG  50

seq1  AACTAATAGAAACATTCACAATTAGAGTAAACTTTTATCAGTGAAGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATAGAAACATTCACAATTAGAGTAAACTTTTATCAGTGAAGTATA  100

seq1  CAAAGGATGAGGTTCAAGTGGAGAAACATCGTTCCATCACCTGATACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATGAGGTTCAAGTGGAGAAACATCGTTCCATCACCTGATACTTG  150

seq1  TTTTTCTCTCTACAATACATTACAATTCTGAACTTTTATTCTCCAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTCTACAATACATTACAATTCTGAACTTTTATTCTCCAATAAA  200

seq1  ATCAAATAGTCTGGCCTGGGTTATTATGTCACTATATTCTCATTCACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATAGTCTGGCCTGGGTTATTATGTCACTATATTCTCATTCACTTA  250

seq1  TAATTATTAATCATCTACCATGAAATAAGTCATACCTCATCTCCAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAATCATCTACCATGAAATAAGTCATACCTCATCTCCAATTTT  300

seq1  TATAACTGCTCCTGTGATATTTCTCTATCCTCATTTTCTACTTTTACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGCTCCTGTGATATTTCTCTATCCTCATTTTCTACTTTTACATT  350

seq1  AGTATGGATTTGACGCCATCCCGCTAACATTTCACCATAACAGGCATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGATTTGACGCCATCCCGCTAACATTTCACCATAACAGGCATATT  400

seq1  AAGTTACACACTTATGTATGTAATTTATCAGATAGGATGAATGTTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACACACTTATGTATGTAATTTATCAGATAGGATGAATGTTTCTCA  450

seq1  AGAAGTTCATGTTCTATACTGAGACTTAGAACGTTAATGCTCAGCAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCATGTTCTATACTGAGACTTAGAACGTTAATGCTCAGCAAGTA  500

seq1  GCTTGGTAGTTGTTCCATGATAATCATAATTGTGACTTGAAATAAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTAGTTGTTCCATGATAATCATAATTGTGACTTGAAATAAATATA  550

seq1  CAGATTATAGTGGTTTGAATAAGAGTAGATCCCATAGACCACATAGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATAGTGGTTTGAATAAGAGTAGATCCCATAGACCACATAGTGTT  600

seq1  TGAATGCTTGGCCCATAGGGAGTGGCACCATTAGGAGGTATAGACTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTTGGCCCATAGGGAGTGGCACCATTAGGAGGTATAGACTGTTG  650

seq1  GAGTAGGTGTGGTCTTGTTAGAGGAAGTATGTCACTGTGGGGGTGGGCT  699
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGTGTGGTCTTGTTAGAGGAAGTATGTCACTGTGGGGGTGGGCT  699