BAC Information

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BAC

Clone NameB6Ng01-016E15
Chromosome16 (Build37)
Map Location 70,019,649 - 70,140,942
singlet/doubletdoublet
Overlap genenone
Upstream geneSpeer2
Downstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E15.bB6Ng01-016E15.g
ACCDH850295DH850296
length1,150894
definitionDH850295|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E15, 5' end.DH850296|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,019,649 - 70,020,794)(70,140,045 - 70,140,942)
sequence
gaattcatagcacttgataggcaatttctggatatttaatacatatttct
ggaaaagaaagaacatagggggaaaaaaagaagagcgtaaaatcatcaac
tcaaagctctactgagaaaaataactggaagtggtgagttcagataatgc
taaggttagatatcagaatgcgtatgccttagccttaaactgtaagaggc
aggctggcagctagctccaactaacaagtcagtcaccattggctggcaga
atttagtattcaggtcaagcagcagcaagtctatgtaagaagagtttctg
gctccaagctgtcagccaatcaaatgaggagactcttgaggacacttgtg
cccattatgcacagcagagagcatgtctatggcagagtgctcctcacagg
aaggactgtgatccagggtatcaacaaatcctcctggtcaaagttgaaaa
tagatcaactcaaaagtgtgataagctctgtggaaacacctcagtgtgaa
ccagagtgggggcgttaaaagcaagtgtgtatcccaagtttttataagaa
attacacatgcacacacacacacagagagacagagagagacagagagaga
cagagggagacagagggagacacagagagagagagaaacagatagacaga
caaatataaatcctagggccttatagtggctatgtgacatagtagagtct
aaagagtaggttgaatagcacctggtccaaagctcttccaaaacttagtc
aaggcaaataatttccatgttttatcaccattgttattctcaataccaac
attcaaagcttacccaaacgtgttctaaagttattgaaatcatctctaat
agcacgttcattaaaacatttccagagtgtcttttaaaaataatcttgga
aaaatagaaacgaatacaaacagtttcatcattttagcaccccaagaata
cttattgtattgctgtgttccaggttcaattccagaagaattacaagcct
ctttattccttatcccctatatgattccggtaaatgcaaaattttctaaa
tccaaatgataccaccacctatatttccagaaatttggaatcctaaacct
tattgtcctctaattgttcctaggcttacctggagctttggtgaccgatt

gaattcctaagaccatgttcccatgttatgggatgacaaggaatttgaga
ttaattagacgtgtttatttggcagatggctcaccatgctatttcaaaga
ttcaaaaagaaagctgataagtttaagaggaagatattggattctagaat
gtcttatctgcagaaggtaatggggaagtgaattatgaggtgagatatca
ttttgagtttaaatgataacatcatcttttatcctggagtcaaggaggct
tccctatatgaaagcagcatagatacttcatccttcctaccagtggagtt
aaggtatctatataaaactgataaatataattgttaaatttgtttctaaa
gtctgggctctgccatcaagtacaatttagaagaaaaaaaatatcatgaa
aaaagaaaagataaaatgctttctagtgatttttttttccttttctggga
ttacatgaaaattgtaagtttttaaaaagaatgaaaccaacttcattcaa
cctctaaatctaggagtttgaaaaagcactgtttttcattttctttcatt
cttccttctcataagcaaaggtggatgaagaaatcacttagttatctcta
actagattgtctccagagaagctaataaacttcaccgtatctaatagtaa
tttaagatgaagaataaactccacacagtctcagatttttttcccacatg
gcaaaagagtcctaagggaagattatagtcctgattagaatgggaatctc
agtgaataacagacagtatatgcaacagagtatcctttattcataatatt
ctagaaactagaagcaagatggggaagaaggctatttctctttcaatgat
tggcatttcagttttgtgatcttaacccagaaattatgtgcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70019649_70020794
seq2: B6Ng01-016E15.b_47_1196

seq1  GAATTCATAGCACTTGATAGGCAATTTCTGGATATTTAATACATATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCACTTGATAGGCAATTTCTGGATATTTAATACATATTTCT  50

seq1  GGAAAAGAAAGAACATAGGGGGAAAAAAAGAAGAGCGTAAAATCATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGAAAGAACATAGGGGGAAAAAAAGAAGAGCGTAAAATCATCAAC  100

seq1  TCAAAGCTCTACTGAGAAAAATAACTGGAAGTGGTGAGTTCAGATAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTCTACTGAGAAAAATAACTGGAAGTGGTGAGTTCAGATAATGC  150

seq1  TAAGGTTAGATATCAGAATGCGTATGCCTTAGCCTTAAACTGTAAGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTAGATATCAGAATGCGTATGCCTTAGCCTTAAACTGTAAGAGGC  200

seq1  AGGCTGGCAGCTAGCTCCAACTAACAAGTCAGTCACCATTGGCTGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCAGCTAGCTCCAACTAACAAGTCAGTCACCATTGGCTGGCAGA  250

seq1  ATTTAGTATTCAGGTCAAGCAGCAGCAAGTCTATGTAAGAAGAGTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTATTCAGGTCAAGCAGCAGCAAGTCTATGTAAGAAGAGTTTCTG  300

seq1  GCTCCAAGCTGTCAGCCAATCAAATGAGGAGACTCTTGAGGACACTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGCTGTCAGCCAATCAAATGAGGAGACTCTTGAGGACACTTGTG  350

seq1  CCCATTATGCACAGCAGAGAGCATGTCTATGGCAGAGTGCTCCTCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTATGCACAGCAGAGAGCATGTCTATGGCAGAGTGCTCCTCACAGG  400

seq1  AAGGACTGTGATCCAGGGTATCAACAAATCCTCCTGGTCAAAGTTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTGTGATCCAGGGTATCAACAAATCCTCCTGGTCAAAGTTGAAAA  450

seq1  TAGATCAACTCAAAAGTGTGATAAGCTCTGTGGAAACACCTCAGTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAACTCAAAAGTGTGATAAGCTCTGTGGAAACACCTCAGTGTGAA  500

seq1  CCAGAGTGGGGGCGTTAAAAGCAAGTGTGTATCCCAAGTTTTTATAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGGGGGCGTTAAAAGCAAGTGTGTATCCCAAGTTTTTATAAGAA  550

seq1  ATTACACATGCACACACACACACAGAGAGACAGAGAGAGACAGAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACATGCACACACACACACAGAGAGACAGAGAGAGACAGAGAGAGA  600

seq1  CAGAGGGAGACAGAGGGAGACACAGAGAGAGAGAGAAACAGATAGACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGAGACAGAGGGAGACACAGAGAGAGAGAGAAACAGATAGACAGA  650

seq1  CAAATATAAATCCTAGGGCCTTATAGTGGCTATGTGACATAGTAGAGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAATCCTAGGGCCTTATAGTGGCTATGTGACATAGTAGAGTCT  700

seq1  AAAGAGTAGGTTGAATAGCACCTGGTCCAAAGCTCTTCCAAAACTTAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTAGGTTGAATAGCACCTGGTCCAAAGCTCTTCCAAAACTTAGTC  750

seq1  AAGGCAAATAATTTCCATG-TTTATCACCATTGTTATTCTCAATACCAAC  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGGCAAATAATTTCCATGTTTTATCACCATTGTTATTCTCAATACCAAC  800

seq1  ATTCAAAGCTTACCCAAACGTGTTCTAAAGTTATTGAAATCATCTCTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGCTTACCCAAACGTGTTCTAAAGTTATTGAAATCATCTCTAAT  850

seq1  AGCACGTTCATTAAAACATTTCCAGAGTGTCTTTTAAAAATAATCTTGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTTCATTAAAACATTTCCAGAGTGTCTTTTAAAAATAATCTTGGA  900

seq1  AAAATAGAAACGAATACAAACAGTTTCATCATTTTAGCA-CCCAAGAATA  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAAATAGAAACGAATACAAACAGTTTCATCATTTTAGCACCCCAAGAATA  950

seq1  CTTATTGTATTGCTGTGTTCCAGGTTCAATTCCAGAAGAATTACAAG-CT  997
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTATTGTATTGCTGTGTTCCAGGTTCAATTCCAGAAGAATTACAAGCCT  1000

seq1  CTTTATT-CTTATCCTCTATATGATT-CGGTAAATGCAAAATTTTTCTAA  1045
      ||||||| ||||||| |||||||||| |||||||||||||| ||||||||
seq2  CTTTATTCCTTATCCCCTATATGATTCCGGTAAATGCAAAA-TTTTCTAA  1049

seq1  ATTCAAATGATACCAC--ACTATA-TTCCAGAAATTT-GAATCCTAAAAC  1091
      || |||||||||||||   ||||| |||||||||||| ||||||| ||||
seq2  ATCCAAATGATACCACCACCTATATTTCCAGAAATTTGGAATCCT-AAAC  1098

seq1  TTTATTGTCCTCTAATTTGTTTCTAGGCTTACCTGGGAAGCTTTGGTGAC  1141
       |||||||||||||| ||||| ||||||||||||||  ||||||||||||
seq2  CTTATTGTCCTCTAA-TTGTTCCTAGGCTTACCTGG--AGCTTTGGTGAC  1145

seq1  AGATT  1146
       ||||
seq2  CGATT  1150

seq1: chr16_70140045_70140942
seq2: B6Ng01-016E15.g_68_960 (reverse)

seq1  TTGCACATAATTTCTAGGTTAAGATCACAAAACTTGAATGCCAATCATTT  50
      ||||||||||||||| ||||||||||||||||||  ||||||||||| ||
seq2  TTGCACATAATTTCTGGGTTAAGATCACAAAACTGAAATGCCAATCA-TT  49

seq1  GAAAGAGAAAATTGCCTTCTTCCCCATCTTGCTTCTAGTTTCTAGAATAT  100
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  GAAAGAG-AAATAGCCTTCTTCCCCATCTTGCTTCTAGTTTCTAGAATAT  98

seq1  TATGAATAAAGGATACTCTGTTTGCATATACTGTCTGTTATTCACTGAGA  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATGAATAAAGGATACTCTG-TTGCATATACTGTCTGTTATTCACTGAGA  147

seq1  TTCCCATTCTAATCAGGACTATAATCTTCCCTTTAGGACTCTTTTGGCCA  200
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  TTCCCATTCTAATCAGGACTATAATCTTCCC-TTAGGACTCTTTT-GCCA  195

seq1  TGTGGGAAAAAAATCTGAGACTGTGTGGAGTTTATTCTTCATCTTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAAAAAATCTGAGACTGTGTGGAGTTTATTCTTCATCTTAAATT  245

seq1  ACTATTAGATACGGTGAAGTTTATTAGCTTCTCTGGAGACAATCTAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAGATACGGTGAAGTTTATTAGCTTCTCTGGAGACAATCTAGTTA  295

seq1  GAGATAACTAAGTGATTTCTTCATCCACCTTTGCTTATGAGAAGGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAACTAAGTGATTTCTTCATCCACCTTTGCTTATGAGAAGGAAGAA  345

seq1  TGAAAGAAAATGAAAAACAGTGCTTTTTCAAACTCCTAGATTTAGAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAAATGAAAAACAGTGCTTTTTCAAACTCCTAGATTTAGAGGTT  395

seq1  GAATGAAGTTGGTTTCATTCTTTTTAAAAACTTACAATTTTCATGTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTTGGTTTCATTCTTTTTAAAAACTTACAATTTTCATGTAATC  445

seq1  CCAGAAAAGGAAAAAAAAATCACTAGAAAGCATTTTATCTTTTCTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAAGGAAAAAAAAATCACTAGAAAGCATTTTATCTTTTCTTTTTT  495

seq1  CATGATATTTTTTTTCTTCTAAATTGTACTTGATGGCAGAGCCCAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATATTTTTTTTCTTCTAAATTGTACTTGATGGCAGAGCCCAGACTT  545

seq1  TAGAAACAAATTTAACAATTATATTTATCAGTTTTATATAGATACCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAAATTTAACAATTATATTTATCAGTTTTATATAGATACCTTAA  595

seq1  CTCCACTGGTAGGAAGGATGAAGTATCTATGCTGCTTTCATATAGGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGGTAGGAAGGATGAAGTATCTATGCTGCTTTCATATAGGGAAG  645

seq1  CCTCCTTGACTCCAGGATAAAAGATGATGTTATCATTTAAACTCAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGACTCCAGGATAAAAGATGATGTTATCATTTAAACTCAAAATG  695

seq1  ATATCTCACCTCATAATTCACTTCCCCATTACCTTCTGCAGATAAGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCACCTCATAATTCACTTCCCCATTACCTTCTGCAGATAAGACAT  745

seq1  TCTAGAATCCAATATCTTCCTCTTAAACTTATCAGCTTTCTTTTTGAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAATCCAATATCTTCCTCTTAAACTTATCAGCTTTCTTTTTGAATC  795

seq1  TTTGAAATAGCATGGTGAGCCATCTGCCAAATAAACACGTCTAATTAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATAGCATGGTGAGCCATCTGCCAAATAAACACGTCTAATTAATC  845

seq1  TCAAATTCCTTGTCATCCCATAACATGGGAACATGGTCTTAGGAATTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCCTTGTCATCCCATAACATGGGAACATGGTCTTAGGAATTC  893