BAC Information

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BAC

Clone NameB6Ng01-016E24
Chromosome16 (Build37)
Map Location 96,301,978 - 96,302,750
singlet/doubletsinglet
Overlap geneBrwd1
Upstream geneLOC666201, Kcnj15, Erg, Ets2, LOC625548, LOC100040997, Dscr2, LOC100041318
Downstream geneHmgn1, Wrb, 4921526F01Rik, Sh3bgr, B3galt5, Jam4, Itgb2l, Pcp4, Dscam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E24.bB6Ng01-016E24.g
ACCDH850311DH850312
length1,170776
definitionDH850311|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E24, 5' end.DH850312|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggatccca
atggaggagctaaagaaagtagccaaggagctaaagggatctgcacccta
taggtggaacaacattatgactaaccagtacccagaagctcttgactcta
gctgcatatgtatcaaagattggcctagtcggcatcactggaaagaaagg
cccattggacagcgacttgtggtgcccgggtacagggacgtcaggtcaat
ggagcaattgcgtggctagc
gaattcatttcctgcttctgagagctcggactaagctctcagaagcagtt
gtgtgtgcctgtcttaacatttccgaggagtggtaacttgcggattacat
ttattttcctttgccttattttccctacttgcttagaggttcttgtgtat
agttgagttttatccaggtaacagaggctttgggtgtttatcgttaacga
agcacaaatgttgcaggagaatatcttcgacaattttaagataaaagact
cacactgagcatattggttacagaaggttgagatgagtgtgtgctgttga
tgtttggctgcacagccccgtttggcttggacttgcagtcctgcttcact
catcctctgctgggtcgggattacaggagagctcactgacttcaccatgt
gtccaagaccagtagtgaacaaaaagtcagccagggcgtcagtcatgcat
gtgggcagttcattctctataccttgttttccagggctaaggagttaact
ggataactagagggctcagcagaacagggcaggagtgctaaagcagcggt
tctcaacccacgggacccaccctttgggggggttgcatgtcagatatcga
cattgcagttcataacagtagtaaaattacagttaagtagcaacgagaat
aactatggttgggggtcaccccaacatgaactgtgcagggctgcagggcc
gcggcgtttggaaggctgaggaccactggtttagagcctctaccattgtc
cttttccacagcccagttgttggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_96301978_96302750
seq2: B6Ng01-016E24.g_70_844 (reverse)

seq1  GGCCAACACCT-GGCTGTGG-AAAGGACAATGGTAGAGGCTCTAGACCAG  48
      |||||||| || |||||||| ||||||||||||||||||||||| |||||
seq2  GGCCAACAACTGGGCTGTGGAAAAGGACAATGGTAGAGGCTCTAAACCAG  50

seq1  TGGTCCTCAGCCTTCCTAACGCCGCGGCCCTGCAGCCCTGCACAGTTCAT  98
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGTCCTCAGCCTTCCAAACGCCGCGGCCCTGCAGCCCTGCACAGTTCAT  100

seq1  GTTGGGGTGACCCCCAACCATAGTTATTCTCGTTGCTACTTAACTGTAAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGTGACCCCCAACCATAGTTATTCTCGTTGCTACTTAACTGTAAT  150

seq1  TTTACTACTGTTATGAACTGCAATGTCGATATCTGACATGCAACCCCCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTACTGTTATGAACTGCAATGTCGATATCTGACATGCAACCCCCCC  200

seq1  AAAGGGTGGGTCCCGTGGGTTGAGAACCGCTGCTTTAGCACTCCTGCCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGGGTCCCGTGGGTTGAGAACCGCTGCTTTAGCACTCCTGCCCT  250

seq1  GTTCTGCTGAGCCCTCTAGTTATCCAGTTAACTCCTTAGCCCTGGAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTGAGCCCTCTAGTTATCCAGTTAACTCCTTAGCCCTGGAAAAC  300

seq1  AAGGTATAGAGAATGAACTGCCCACATGCATGACTGACGCCCTGGCTGAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATAGAGAATGAACTGCCCACATGCATGACTGACGCCCTGGCTGAC  350

seq1  TTTTTGTTCACTACTGGTCTTGGACACATGGTGAAGTCAGTGAGCTCTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCACTACTGGTCTTGGACACATGGTGAAGTCAGTGAGCTCTCC  400

seq1  TGTAATCCCGACCCAGCAGAGGATGAGTGAAGCAGGACTGCAAGTCCAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCCGACCCAGCAGAGGATGAGTGAAGCAGGACTGCAAGTCCAAG  450

seq1  CCAAACGGGGCTGTGCAGCCAAACATCAACAGCACACACTCATCTCAACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACGGGGCTGTGCAGCCAAACATCAACAGCACACACTCATCTCAACC  500

seq1  TTCTGTAACCAATATGCTCAGTGTGAGTCTTTTATCTTAAAATTGTCGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAACCAATATGCTCAGTGTGAGTCTTTTATCTTAAAATTGTCGAA  550

seq1  GATATTCTCCTGCAACATTTGTGCTTCGTTAACGATAAACACCCAAAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTCCTGCAACATTTGTGCTTCGTTAACGATAAACACCCAAAGCC  600

seq1  TCTGTTACCTGGATAAAACTCAACTATACACAAGAACCTCTAAGCAAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACCTGGATAAAACTCAACTATACACAAGAACCTCTAAGCAAGTA  650

seq1  GGGAAAATAAGGCAAAGGAAAATAAATGTAATCCGCAAGTTACCACTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATAAGGCAAAGGAAAATAAATGTAATCCGCAAGTTACCACTCCT  700

seq1  CGGAAATGTTAAGACAGGCACACACAACTGCTTCTGAGAGCTTAGTCCGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAATGTTAAGACAGGCACACACAACTGCTTCTGAGAGCTTAGTCCGA  750

seq1  GCTCTCAGAAGCAGGAAATGAATTC  773
      |||||||||||||||||||||||||
seq2  GCTCTCAGAAGCAGGAAATGAATTC  775