BAC Information

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BAC

Clone NameB6Ng01-017C18
Chromosome16 (Build37)
Map Location 82,212,270 - 82,212,899
singlet/doubletsinglet
Overlap genenone
Upstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
Downstream geneEG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C18.bB6Ng01-017C18.g
ACCDH850930DH850931
length6301,013
definitionDH850930|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C18, 5' end.DH850931|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgtggcacacacggct
ctcctcagagattactggcggcacacatgcgattgctcgcagcacgcacc
ggctttccacaacagtgggccacatgattgtaaggctactccaaagctcc
tggttactgtctgggcctgcatttagcggagacgttttgttgttctggtg
actgagttatttgtttgataggatgagtttatataggtttttgctaatgc
tgcacagccttccacataatgcagtctatttttattataggtattaaact
gtaataaatatggagatttttgatcaaagttcacctacagtatatatttc
ccttattgagcatatatatccccaaatgattccagtgatactggccccct
atcacctctacctaaacaaaaacagtgaatcactgaatataatctattta
aattcactagtcattattggaaaactaatttatttcattattcagattgg
gttctatacagatttccacgtagaaatcattaacaggatgttaagtttat
tgttcagatatgcatgtgtgtgtgtgtgtg
gaattccaggacagccagggctatacagagaaaccctgcatcaaaacaaa
aacaaacaaacaaaacaaaaacaaacaaacaaactctcattcttatactc
agttctctgaattttaatgaattacaatttgtacaattttacttttactt
ttatgttttcctcatattgttctgtgctttagagatactaccagcttatt
tacaatagccagaagccggaaagaatccagattccctcaacagaggaatg
gatacagaaaatgtggtacatttacacaatgaagtactactcagctatta
aaaagaatgaatttatgaaattcctaggcaaatagatggacctggagggc
atcatcctgagtgaggtaacccaatcacaaaagaacgcacacaatatgta
ctcactgataagtggatattagcccagaaacttagaatacccaagatata
agatacaatttgctaaacacatgaaattcaagaagaacaaagaccaaagt
gtggacactttgccccttcttagaattgggaacaaaacacccatccaagg
agttgcagagacacagtttggggctgagacaaatggatggaccatctaga
gactgccatatctgggaatccatcccataatcagcttccaaaagctgaca
ccattgcatacactagcaagattttgctgaaaggacccagatatagctgt
ctcttgtgagactaggccggggcctagcaaacacagaagtggatgcacac
agtcaactattggatggatcacatggcccccaatggaggagctagagaaa
gtaaccaaaggagctaaagggatctgcaaccctataggtggaacaacaat
ttgaactacccagtactccccagagctcgtgtctctagctgcatatgtat
cagaagatggtcttcagtggaaagagtggcccgttggtcatgcaaacttt
atctgcctcagtacaggggaacaccagggtcaagaagtaggactgggtgg
ggtggggggaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82212270_82212899
seq2: B6Ng01-017C18.b_45_674

seq1  GAATTCACTCTTGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50

seq1  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGTGGCACACACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCGTGGCACACACGGCT  100

seq1  CTCCTCAGAGATTACTGGCGGCACACATGCGATTGCTCGCAGCACGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGCGGCACACATGCGATTGCTCGCAGCACGCACC  150

seq1  GGCTTTCCACAACAGTGGGCCACATGATTGTAAGGCTACTCCAAAGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCACAACAGTGGGCCACATGATTGTAAGGCTACTCCAAAGCTCC  200

seq1  TGGTTACTGTCTGGGCCTGCATTTAGCGGAGACGTTTTGTTGTTCTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACTGTCTGGGCCTGCATTTAGCGGAGACGTTTTGTTGTTCTGGTG  250

seq1  ACTGAGTTATTTGTTTGATAGGATGAGTTTATATAGGTTTTTGCTAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTATTTGTTTGATAGGATGAGTTTATATAGGTTTTTGCTAATGC  300

seq1  TGCACAGCCTTCCACATAATGCAGTCTATTTTTATTATAGGTATTAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGCCTTCCACATAATGCAGTCTATTTTTATTATAGGTATTAAACT  350

seq1  GTAATAAATATGGAGATTTTTGATCAAAGTTCACCTACAGTATATATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAATATGGAGATTTTTGATCAAAGTTCACCTACAGTATATATTTC  400

seq1  CCTTATTGAGCATATATATCCCCAAATGATTCCAGTGATACTGGCCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTGAGCATATATATCCCCAAATGATTCCAGTGATACTGGCCCCCT  450

seq1  ATCACCTCTACCTAAACAAAAACAGTGAATCACTGAATATAATCTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCTACCTAAACAAAAACAGTGAATCACTGAATATAATCTATTTA  500

seq1  AATTCACTAGTCATTATTGGAAAACTAATTTATTTCATTATTCAGATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTAGTCATTATTGGAAAACTAATTTATTTCATTATTCAGATTGG  550

seq1  GTTCTATACAGATTTCCACGTAGAAATCATTAACAGGATGTTAAGTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATACAGATTTCCACGTAGAAATCATTAACAGGATGTTAAGTTTAT  600

seq1  TGTTCAGATATGCATGTGTGTGTGTGTGTG  630
      ||||||||||||||||||||||||||||||
seq2  TGTTCAGATATGCATGTGTGTGTGTGTGTG  630