BAC Information

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BAC

Clone NameB6Ng01-021B05
Chromosome16 (Build37)
Map Location 61,296,722 - 61,297,776
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170, LOC100043524
Downstream geneLOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B05.bB6Ng01-021B05.g
ACCDH853685DH853686
length1,0431,079
definitionDH853685|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B05, 5' end.DH853686|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtctttgcagtaagtcagacaaattgctgtgttatattataa
actttaaactttcactgagaggtgtcctaacacagaataacttctaaaat
atactatggaataggatattgagaaaatgtaaaatatgtcaatgttttga
gaaatatagagggaagaaattttagtggccataaaattgaatactcatga
aagtaatgaaaggttagtagtaattaattaagagttcacaaagatgcaag
aatgtcaaaggctttgtaaatagcaagttattttcatttcctacacctat
cagaaacagtaaagaatgagtaagaaaatatagctttcctgatataacaa
taaattagcctaatgaagttgtttgtgtccacgtgcatgtgtgcatgtgt
gtgcatgtgtgtgcatgtgtgtctgtgtatgtgtttttaactatgtcaac
aatcatcataacacattaacatttataaatggaagcacactaacatatgc
tgatatatattataaattgaagcatactaacattcttatattacatactt
tattttatttatatttgaactaaatggtatgccttagaaacaaatgttta
aaaaacataagattccaagaattataattagagtatacaaaaatcagaaa
actttcccaataacttaatatttgaaaaatgtacctgttattatttaaga
gtctgaatatgctctaaaaatgaaaaaaaaaaaaaaagcaagtatagggt
cttagtattattttaaccaagaacgtaagggattaagagaagaaaatagg
cttagaatttttaaattgtcaggcagaagtgaagaaatacaaacaagcta
ttaatggataatttgtaagatgtaaagttatagttattgcttatcattta
attgtaaaagacaaatttagtagtttgtaagtgaacaaatttaaatgact
ctacataatctactgaacatatagagtatttatcagatgactgaaaatat
ttcagggctcccaagatagttcactgataagcacttgcttcta
gaattctcagtccatatgaaaatacttatatatatatatatatatatata
tatatatatatatatatatatatatatacacacacacacacatgcataca
tatgtgtatacagattatatgtgttataatattttaaaaataattaaata
attttaggtatataattaatagcatggtttcttacttcaggatatatttt
cttatatgaacctttgaagctaagcatctccagtgagagagattatgtac
tgttggtttttctgggtctgggttacattattcccacagaatttttctat
ttccaaccaatcacctacaaagttgatgttattttgtttttagctgaata
atctataatgcatatgaatcacattttaattatgcatttttagtgatatg
ctcataggttgttctcatatcctagttatagcaaacaaatagaaattaag
atggctgaggtggtttctgtggagggattgtcaggtagtttatgcatatg
ccaaggagtatagctgggtcatattgtagacttatcttcagcttttattg
agaaaatttcacaatgatatcaacagtagctgcaccagtttgccatccac
accaacagtgagtgaagagtccctgtgctcacacaccctctaacttttgt
agtttcttattttgttggcctttactgttttgactagggacagtggacat
ttcaaactacccttgctttgaatttccctaatttctagggaaagatgact
atttttgagttatttgttttctagtcttctctatttttgtgtttctatgt
acatgtttcctgtccaatttgtgtatgagtacatatttttactctttgac
gttttctttataggtctagcaaaaaatctgtcaggtgcacactagcaaag
attttctcccattctgtggggctccttttactttgtgattgtttaactcc
ggagaacataattttattaagctcacatctccttgtttttcgtaattctg
ggaaatttcaagacgagagcctttcttaaccttataagcagaagggctaa
ggttctcttgcccctcggattcaaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61296722_61297776
seq2: B6Ng01-021B05.b_48_1090

seq1  GAATTCAAGTCTTTGCAGTAAGTCAGACAAATTGCTGTGTTATATTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCTTTGCAGTAAGTCAGACAAATTGCTGTGTTATATTATAA  50

seq1  ACTTTAAACTTTCACTGAGAGGTGTCCTAACACAGAATAACTTCTAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAACTTTCACTGAGAGGTGTCCTAACACAGAATAACTTCTAAAAT  100

seq1  ATACTATGGAATAGGATATTGAGAAAATGTAAAATATGTCAATGTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGGAATAGGATATTGAGAAAATGTAAAATATGTCAATGTTTTGA  150

seq1  GAAATATAGAGGGAAGAAATTTTAGTGGCCATAAAATTGAATACTCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAGAGGGAAGAAATTTTAGTGGCCATAAAATTGAATACTCATGA  200

seq1  AAGTAATGAAAGGTTAGTAGTAATTAATTAAGAGTTCACAAAGATGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGAAAGGTTAGTAGTAATTAATTAAGAGTTCACAAAGATGCAAG  250

seq1  AATGTCAAAGGCTTTGTAAATAGCAAGTTATTTTCATTTCCTACACCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAAAGGCTTTGTAAATAGCAAGTTATTTTCATTTCCTACACCTAT  300

seq1  CAGAAACAGTAAAGAATGAGTAAGAAAATATAGCTTTCCTGATATAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGTAAAGAATGAGTAAGAAAATATAGCTTTCCTGATATAACAA  350

seq1  TAAATTAGCCTAATGAAGTTGTTTGTGTCCACGTGCATGTGTGCATGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGCCTAATGAAGTTGTTTGTGTCCACGTGCATGTGTGCATGTGT  400

seq1  GTGCATGTGTGTGCATGTGTGTCTGTGTATGTGTTTTTAACTATGTCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGTGTGCATGTGTGTCTGTGTATGTGTTTTTAACTATGTCAAC  450

seq1  AATCATCATAACACATTAACATTTATAAATGGAAGCACACTAACATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCATAACACATTAACATTTATAAATGGAAGCACACTAACATATGC  500

seq1  TGATATATATTATAAATTGAAGCATACTAACATTCTTATATTACATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATATTATAAATTGAAGCATACTAACATTCTTATATTACATACTT  550

seq1  TATTTTATTTATATTTGAACTAAATGGTATGCCTTAGAAACAAATGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTATATTTGAACTAAATGGTATGCCTTAGAAACAAATGTTTA  600

seq1  AAAAACATAAGATTCCAAGAATTATAATTAGAGTATACAAAAATCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATAAGATTCCAAGAATTATAATTAGAGTATACAAAAATCAGAAA  650

seq1  ACTTTCCCAATAACTTAATATTTGAAAAATGTACCTGTTATTATTTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCAATAACTTAATATTTGAAAAATGTACCTGTTATTATTTAAGA  700

seq1  GTCTGAATATGCTCTAAAAATGAAAAAAAAAAAAAAAGCAAGTATAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATATGCTCTAAAAATGAAAAAAAAAAAAAAAGCAAGTATAGGGT  750

seq1  CTTAGTATTATTTTAACCAAGAACGTAAGGGATTAAGAGAAGAAAATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATTATTTTAACCAAGAACGTAAGGGATTAAGAGAAGAAAATAGG  800

seq1  CTTAGAATTTTTAAATTGTCAGGCAGAAGTGAAGAAATACAAACAAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAATTTTTAAATTGTCAGGCAGAAGTGAAGAAATACAAACAAGCTA  850

seq1  TTAATGGATAATTTGTAAGATGTAAAGTTATAGTTATTGCTTATCATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGATAATTTGTAAGATGTAAAGTTATAGTTATTGCTTATCATTTA  900

seq1  ATTGTAAAAGACAAAATTTAGTAGTTTGTAAGTGAAACAAAATTTAAATG  950
      |||||||||||| |||||||||||||||||||||||   |||||||||||
seq2  ATTGTAAAAGAC-AAATTTAGTAGTTTGTAAGTGAA--CAAATTTAAATG  947

seq1  ACTCTACATAATCTACTGAAACATATAAGAGTATATATCAGGATGACATG  1000
      |||||||||||||||||| ||||||| ||||||| ||||| ||||||   
seq2  ACTCTACATAATCTACTG-AACATAT-AGAGTATTTATCA-GATGAC--T  992

seq1  GAAAATATTTCAGGGGCTCACAAGATAGTTCAACTGATAAAGGCACTTGC  1050
      |||||||||||| |||||| ||||||||||| ||||||||  ||||||||
seq2  GAAAATATTTCA-GGGCTCCCAAGATAGTTC-ACTGATAA--GCACTTGC  1038

seq1  TTCTA  1055
      |||||
seq2  TTCTA  1043